| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1933 |
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| Symbol | |
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| ID | 4672961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2023347 |
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| End bp | 2024015 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639839014 |
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| Product | ribosomal large subunit pseudouridine synthase A |
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| Protein accession | YP_986189 |
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| Protein GI | 121594293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.640885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGCCA GCCCATCAGA GGGCGTCCGC AGCGTGCACG TGGACGACAC GCTGCTGGTG
CTGGACAAGC CCTCGGGATT GCTGTGCGTG CCCGGACGGG GCCCCGACAA GCAGGATGCC
TTGAGTACGC GTGCCCAGGC GCTGTGGCCC GACGCGCTCA TCGTGCACCG GCTGGACCAG
CCCACGTCGG GACTGGTGCT CATGGCGCGG GGCGCCGCGA TGCAGCGGGC CCTCAGCCAC
AGCTTCGCCC AGCGGCTGGT GCACAAGCGC TACCGCGCCG TGGTGGCGGG CCGCATGCCG
CCGCCCGACC CTGCGCACGC GGACGGCTGG GGCGAGATCG CGCTGCCCAT CGCGGCGGAC
TGGGAACGCC GCCCGCTGCG CGTGGTGGAT GCCACGCACG GCCAGCCCAG CCTCACGCGT
TGGCGCGTGC TGGCGCACGA CGCCGCCCGC GACACCACCT CCGTGGAGCT GGAACCCGTC
ACCGGTCGCA CGCACCAGCT GCGCGTACAC CTGGCGGCAC TGGGCCACCC CATCCTGGGC
GACCAGCTCT ATGCCGATGC GTCGGTACAA GCCCGCGCAC CGCGCCTGTT GCTGCACGCC
TGCGTGCTGG AGTTCGCGCA CCCGCTGCAG GGTGGCTGGT GCGCGTTTGC CTCGGCACCG
CCGTTTTGA
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| Protein sequence | MPASPSEGVR SVHVDDTLLV LDKPSGLLCV PGRGPDKQDA LSTRAQALWP DALIVHRLDQ
PTSGLVLMAR GAAMQRALSH SFAQRLVHKR YRAVVAGRMP PPDPAHADGW GEIALPIAAD
WERRPLRVVD ATHGQPSLTR WRVLAHDAAR DTTSVELEPV TGRTHQLRVH LAALGHPILG
DQLYADASVQ ARAPRLLLHA CVLEFAHPLQ GGWCAFASAP PF
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