Gene Ajs_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1930 
Symbol 
ID4672751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2020097 
End bp2021089 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID639839011 
Producthypothetical protein 
Protein accessionYP_986186 
Protein GI121594290 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.886467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTC GACACATCCT TTCTCTTGCC ACCCTCGCCT GTGCATTGGG CGCTATGCCC 
GCCCATGCCC AGACCAGTGC ACCCGCTGCC GGCGCCTATC CCGCCAAGCC CATCCGTTTG
ATCGTGCCCT TCCCGCCCGG CGGCGGCACC GACATCCTGG CCCGCCTGGT CGCCGCCAAG
CTGACGGAAG CCAACAAATG GACCGTGGTG GCCGACAACA AGCCGGGAGC TGGCGGCACC
ATCGGTATTA CCGAGGCGGT GAAGGCCGCT CCCACAGGCT ATGACATCGT CATGGGCCAG
AAGGACAATC TGGTCATCGG CCCCTGGCTG TACAAGAACC TGCCGTGGGA CCCCACCAAG
GACCTGACGG CCGTGGCCCA CGTGGCGTAC ACGCCCGTGG TCATCGCCAC GAGTGTCAAC
TCCAAGTACA AATCTTTGGC CGACGTGGTG GCGGCCGCCA AGGCCGCGCC GGGCACCGTC
ACCTATGGCT CGCCCGGCAA CGGCACCTCC ATTCACCTGG CGGGCGACCT GTTCGAGAAA
GCTGCCGGCA TCAAGCTGAG CCACGTGCCC TACAAAGGCT CCAACCCGGC ACTCATGGAT
GCGTTGGCGG GCAATGTGGA ACTGCTGGTT TCGTCGCTGC CTTCGGCCAT GGGACAGATC
AAGGCGGGCA AGCTGCGCCC GTTGGCGGTC ACCTCGGCCA AGCGCAGTTC GTCGCTGCCC
GACGTGCCCA CGGTGGCCGA GTCCGGCTTC AAGGGCTTTG ACGTGAGCAC CTGGTACGGC
GTGCTGGCGC CGGCAGGCAC GCCGCCAGCC GTGGTGAACA CGCTCAACGC GGAAGTCAAC
AAACTGCTCG CCACCGCGGA CATGAAGGCT GCCATCCAAG CGCAAGGCGC AGAGCCGCAG
GCCATGTCGC CGGAACAGTT CTCAACCCTG CTCAAAAACG AATACGGGCA GTGGAAGGGT
ATCGTGGAAG CCTCGGGTGC ACGGATTGAG TAA
 
Protein sequence
MLRRHILSLA TLACALGAMP AHAQTSAPAA GAYPAKPIRL IVPFPPGGGT DILARLVAAK 
LTEANKWTVV ADNKPGAGGT IGITEAVKAA PTGYDIVMGQ KDNLVIGPWL YKNLPWDPTK
DLTAVAHVAY TPVVIATSVN SKYKSLADVV AAAKAAPGTV TYGSPGNGTS IHLAGDLFEK
AAGIKLSHVP YKGSNPALMD ALAGNVELLV SSLPSAMGQI KAGKLRPLAV TSAKRSSSLP
DVPTVAESGF KGFDVSTWYG VLAPAGTPPA VVNTLNAEVN KLLATADMKA AIQAQGAEPQ
AMSPEQFSTL LKNEYGQWKG IVEASGARIE