Gene Ajs_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1922 
Symbol 
ID4672427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2013395 
End bp2013835 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content62% 
IMG OID639839003 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_986178 
Protein GI121594282 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.127132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG TGGCATTCCA CTTCAATGCA CCCGACAAAC TGGCGTATGT CTGTCGCCTG 
GTGCGAAAAG CCACCCGGCA GGATGCGCGG GTGACGGTCA CGGGTGATGC AGACACCTTG
CTGCGGCTGG ATCGCCAGCT CTGGGCGTTG GCGCCTTCGG ATTTCGTCGG CCATTGCCTG
GGAGACGCCG ACGAGGAAAT TCTGCGTGCC TCTCCCACCG TGTTGGTGCA AGACCCTCGT
ACCAGTCCGA ATCGGGACGT GTTGGTCAAC CTGGGAAATG TCTTGCCCGA GGGATTTGCG
CAGTACGCTC GGGTCGTGGA GGTGGTCAGC CAGGTGGATG AGGATGATCG GAAGCGCGCG
CGGGAGCGCT GGCGCGGCTA TGCCGCGCTG GGGTATGACA TCGTTCGCCA CGATCTGGTA
CTCAAGGAAA GCGCGGGATG A
 
Protein sequence
MTQVAFHFNA PDKLAYVCRL VRKATRQDAR VTVTGDADTL LRLDRQLWAL APSDFVGHCL 
GDADEEILRA SPTVLVQDPR TSPNRDVLVN LGNVLPEGFA QYARVVEVVS QVDEDDRKRA
RERWRGYAAL GYDIVRHDLV LKESAG