| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1837 |
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| Symbol | |
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| ID | 4671977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1916165 |
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| End bp | 1917589 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639838925 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_986100 |
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| Protein GI | 121594204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.436573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCC GGCACAATGG CCGCATGCGT TTTCTCTTCA TGCCCGACAC CCTCACCCGG
CGCCGCGCCG CCGCCTCCGC ACTGGGCCTG GCAGCACTGG CGGGGTGCGC CTCCGCTCCG
CCCGCTACCC CCGCCGTAGC GGCTCCATCC GCTGCACCCA GCGCCCCGGC GCCCGCGCCG
GTCATCCCCC AACTGCCCTC GCCCGCAGCG CCCACCACCC CGGCGCCTGC CCCGGCAGCA
TCCACCGTGG AACCTGCGAG CACGCCGGTC GCGCCGGCGG CGCCCGACAC CACCGCAACC
ACGCTGGCCG GCTTCCACGC CTGGGTGAGC GCCTTTGCAC GCGAGGCGCT GGCCGCCGGC
ATCCGCCCGC AGACCGTGGC CGCCACCCTG GGCCAGGCGC AGTGGCAACC GCGCGTGGTG
GAACTGGACC GCGCCCAGCC CGAATTCACC CGCCCGCCCT GGGCCTACCT GGACAGCGCA
GTGTCACCCC AGCGTATTGC GCAGGGACGC GAGCAGCGCC GCCAGTACGC CGACGCGCTG
GACGCGGCAG CGCAGCGCTA CGGCGTGCCC GCCAGCGTGG TCACGGCCAT CTGGGGCATG
GAGAGCAACT ATGGCCGCAA CTTCGGCAGC TTCCGCACCG TGGATGCGCT GGCCACCCTC
GCCTACGACG GGCGCCGCAG CGCCTGGGCC CAGCGGGAGC TGCTGGCCGC GTTGCGCATC
GTGGACCAGG GCGACATCGC GGCCGACGCG CTCATCGGCT CCTGGGCCGG GGCCATGGGG
CACACGCAGT TTCTGCCCTC GGTGTTCCTT GCCCATGCGG TGGATGCCGA CGGGGACGGG
CGGCGCGACA TCTGGGGCAG CGTGCCCGAC GTGGTGGCGT CCACGGCCAA CTTCCTGGCC
CATTCGGGCT GGAAGAGCGG TGAGCCGTGG GGCGCCGAAG TGCTGCTGCC GCCCGGCTTC
GACTACGCAC GCGCCGAACT GAGCGTGCGC CAGGCCAGCA GCGACTGGGC CGCTGAAGGG
GTGCGCGGGG TGGATGGCGC AGAACTGCCG CCGCTGCAGG ACGCCTCCGT CCTTACCCCG
GCAGGCGCGC GTGGTCCCGC CATCCTGGTC GGGCCCAACT TCCGCGCGCT GCTGCGCTAC
AACAACTCGG TGAACTACGC CCTGGCCGTC GGCCTGCTGG CACGGCAGAT CGACGGCGGC
GCGGGCCTGG CATCCGCCTG GCCGCGCGAA CTGCAGCCTC TGTCGCGCAG CGAAGTACGC
GCGCTGCAGG AGGCGCTGAA CGCGCGCGGC CTGGACACCG GCACGCCCGA CGGCGTGGCA
GGGCCCGCCA CGCGCGCCGG GGTGCGCCGC TACCAGCAAA GTGTGGGCTT GCCCGCCGAC
GGCTATGCCA CGCGCGAACT ATTGCAGCGA CTGCTGACGC CCTGA
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| Protein sequence | MAGRHNGRMR FLFMPDTLTR RRAAASALGL AALAGCASAP PATPAVAAPS AAPSAPAPAP
VIPQLPSPAA PTTPAPAPAA STVEPASTPV APAAPDTTAT TLAGFHAWVS AFAREALAAG
IRPQTVAATL GQAQWQPRVV ELDRAQPEFT RPPWAYLDSA VSPQRIAQGR EQRRQYADAL
DAAAQRYGVP ASVVTAIWGM ESNYGRNFGS FRTVDALATL AYDGRRSAWA QRELLAALRI
VDQGDIAADA LIGSWAGAMG HTQFLPSVFL AHAVDADGDG RRDIWGSVPD VVASTANFLA
HSGWKSGEPW GAEVLLPPGF DYARAELSVR QASSDWAAEG VRGVDGAELP PLQDASVLTP
AGARGPAILV GPNFRALLRY NNSVNYALAV GLLARQIDGG AGLASAWPRE LQPLSRSEVR
ALQEALNARG LDTGTPDGVA GPATRAGVRR YQQSVGLPAD GYATRELLQR LLTP
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