| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1834 |
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| Symbol | |
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| ID | 4672032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1913004 |
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| End bp | 1914155 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639838922 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_986097 |
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| Protein GI | 121594201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.41663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.322468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC CCCGTCTGCA GCGCCGCACG CTGGCGCTGA TCGCCGTCAT TGCGCCGCTG
GTGGCGCTGT TCGTCTATGT CGCTCTGCGT TCGGGGCCGC TGGCGCCCGT GGCGGTCACG
CTGGGCAGCG TGCAATCGCG CGCCATTGCC CCGGCACTCT CGGGCATCGG CACGGTGCAG
GCGCGGTATC TGTACAAGAT CGGCCCCACC TTCGCGGGGC GCGTGCAGCG CCTGGACGTG
CAGGTGGGCG ACAGGGTTGA GGCTGGGCAG GTGCTGGGCG AAATGGACCC GGTGGACCTG
GACGACCGCG TGCGCGCACA GCAGGCGGCC ATTAAGAGCG CCGAAGCCGC GCTGCGCCAG
GCAGAGGCCA GGCAGAGCTA TGCGCAGACC CAGCACCAGC GCTACGGGCA ACTGGTGGCG
GTGCGCGGCA CCAGCGAGGA AAGCTACGCC ACCAAGCAGC AGGAACTGGC CGTGGCAGAC
GCCGCGCTGG CCGCTGCCCG CGAGGATGCG AGCCGTCTGC GCGCTGACTT GCAGGCATTG
CGCGCGCAGC GTGGCAACCT GCGGCTGGTG TCGCCCGTGG CCGGCATGGT GGCTGCGCGC
GATGCCGACC CTGGCACGAC CGTGGTGGCG GGGCAGGCGG TGGTAAAGCT CATCGACCCG
GCCAGCCTGT GGATCGACAC GCGCTTTGAC CAGATCACCG CCCAAGGGTT GGCGGCGCAG
CTACCGGCCG AGGTGGTGCT GCGCTCGCGC CGCGGGGACA ACCTGGTCGG CAGCGTGCTG
CGCGTCGAGC CCCTGGCGGA CGCGGTGACA GAGGAGACGC TGGCCAAGAT CGTCTTCGAT
GCACCGGTTA CACCGCTGCC CCCCGTCGGT GAACTGGCCG AGGTCACCGT GCGCCTGCCG
GCACTGCCCG AAGCGCCCAC CATCCCCAAT GCGGCCATCC GCTTCGTGGA CGGGCAGCGC
GGCGTGTGGA AGCTGGTCGG TGGCAAGCCG CAGTTTGCGC AGGTACGCCT GGGCCGTGCG
GACCTCGACG GCCATGTGCA GGTGCTGGAC GGGCTGGCCG TGGGCGACTC CATCGTGGTG
TACAGCGAGA GGGCGCTCAC GGCGCGCAGC CGCGTGCACG TGGTCGAGCG CATTGCCGGG
GTGGCGCCTT GA
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| Protein sequence | MKFPRLQRRT LALIAVIAPL VALFVYVALR SGPLAPVAVT LGSVQSRAIA PALSGIGTVQ
ARYLYKIGPT FAGRVQRLDV QVGDRVEAGQ VLGEMDPVDL DDRVRAQQAA IKSAEAALRQ
AEARQSYAQT QHQRYGQLVA VRGTSEESYA TKQQELAVAD AALAAAREDA SRLRADLQAL
RAQRGNLRLV SPVAGMVAAR DADPGTTVVA GQAVVKLIDP ASLWIDTRFD QITAQGLAAQ
LPAEVVLRSR RGDNLVGSVL RVEPLADAVT EETLAKIVFD APVTPLPPVG ELAEVTVRLP
ALPEAPTIPN AAIRFVDGQR GVWKLVGGKP QFAQVRLGRA DLDGHVQVLD GLAVGDSIVV
YSERALTARS RVHVVERIAG VAP
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