| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1779 |
|---|
| Symbol | |
|---|
| ID | 4672460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1846527 |
|---|
| End bp | 1847246 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838867 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_986043 |
|---|
| Protein GI | 121594147 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.72161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATC CGATTCTTAC CATCGATGAA CGCGAGGCGA TCAACTCAGG TCGCTGGTTT
TCTTCCCTCT CCCCTTCTTT GCGCCACGAC ATACTGCGAT GCTCCTACGT CAAACGCTTC
AAGGATGGCG CACTCATCGC AGCACGCGGC GACCCGCCCG AGGAATGGAT TGCCTGCGCG
CGCGGCGCCG TGCGCGTGAG CTCCACCTCG ATCTCCGGCA AGCAGATCAC GCTGACCTAT
GTGGAGCCGG GCATCTGGTT CGGCGACGTG GCGATCTTCG ACGGCGACCG GCGCACGCAC
GACGCCTATG CGCATGGGGA CACCACCATC GTCTGCGTGG CGCGGGCAGA CTTCCGCAAG
ATCCTCGCGC AGCACACCGA GCTCTACGAA GCCATGCTGC GCCTGCATGC ACGGCGCATC
CGGCAGCTGT TCGGGCTGGT GGAAGACCTC AACACCCTGC CCCTGCGCTC GCGGCTGGCC
AAGCAGTTGC TGCACCTGGT GCGCAGCTAT GGCGTGCCCA GCCTGTCCGA CGGCAACGAA
GTGCGCATCA GCCTGCAACT GGCCCAGGAA GAACTGGCGC AGTTGCTGGG CGCGTCACGC
CAGCGCGTGA ACCAGGAGCT AAAGGCCATG GAGCGCGAGG ACGCCATCCG CATCGAGCCC
GGCGGCCTCG TGATACGCGA CCGGGATGCG CTGATGCGCA TCTCCGAAGC CAACCAATGA
|
|---|
| Protein sequence | MDDPILTIDE REAINSGRWF SSLSPSLRHD ILRCSYVKRF KDGALIAARG DPPEEWIACA
RGAVRVSSTS ISGKQITLTY VEPGIWFGDV AIFDGDRRTH DAYAHGDTTI VCVARADFRK
ILAQHTELYE AMLRLHARRI RQLFGLVEDL NTLPLRSRLA KQLLHLVRSY GVPSLSDGNE
VRISLQLAQE ELAQLLGASR QRVNQELKAM EREDAIRIEP GGLVIRDRDA LMRISEANQ
|
|---|
| |