Gene Ajs_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1716 
Symbol 
ID4673507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1785646 
End bp1786647 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID639838805 
Productaminodeoxychorismate lyase 
Protein accessionYP_985982 
Protein GI121594086 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.998027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.24374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGTT TCCTCGCATT GGTGTTGCTC ATCGTGATCG CAGTGGGCGC TGTGGCCGCC 
TGGTGGCTGC AGGCGCCGTT GCCGGTGCGC GCGGACGTGC CCGCCGGCCA GCCGCTGGAG
CTGGAGATCG AGCCTGGCAC CACGCCACGC GGCGTGGCCC GCGCGGTGGT GCGGTCGGGC
ATGGCCACGG ATGCAGACGT GCTGTTCCTG TGGTTCCGGT TGTCGGGCAA GGACCGCGAG
ATCAAGGCCG GCAACTACGA GATTCCCCAG GGCACCAGCC CCTACGCGCT GCTACAGAAG
CTGGTGCGCG GCGAGGAGGC ATTGCGCGCC GTCACGCTGG TGGAAGGCTG GACCTTTCGC
CAGGTGCGCC AGGCGCTGGC GCGTGCCGAG CAGCTCAAGC CCGACAGCCA GGGCCTGAGC
GACGCGGACA TCATGGAGCG CCTGGGCCGC GCGGGCGTGC CCGCGGAGGG GCGCTTCTTT
CCCGACACCT ACACCTATGC CAAGGGCAGC AGCGACATTG CCGTGCTGCG TCGCGCGCTG
CACGCCATGG ACCGGCGTCT GGACGCGGCC TGGGCGCAGC GCGCGCCGGA CACGCCGCTC
CAATCCGCCG ACCAGGCGCT GATCCTGGCG AGCATCGTCG AGAAGGAAAC CGGCCGCGCC
GAAGACCGCG CGCAGATCGC CGGCGTGTTC AGCAACCGCC TGCGCGTCGG CATGCTGCTG
CAGACCGACC CCACGGTGAT CTACGGCCTG GGTGAGAAGT TCGACGGCAA CCTGCGCCGC
CGTGACCTGA CCGCCGACAC CCCCTACAAC ACCTACACAC GTGCGGGCCT GCCGCCCACG
CCGATTGCCA TGCCCGGCAA GGCGGCGCTG TTGGCCGCGG TGCAGCCCGC GCCCACCAAG
GCGCTGTACT TCGTGGCGCG CGGCGACGGT TCCAGCCACT TCAGCAGCAC GCTCCAAGAC
CACAACCGTG CGGTGAACCG CTACCAACGC GGCCAGAAAT GA
 
Protein sequence
MRRFLALVLL IVIAVGAVAA WWLQAPLPVR ADVPAGQPLE LEIEPGTTPR GVARAVVRSG 
MATDADVLFL WFRLSGKDRE IKAGNYEIPQ GTSPYALLQK LVRGEEALRA VTLVEGWTFR
QVRQALARAE QLKPDSQGLS DADIMERLGR AGVPAEGRFF PDTYTYAKGS SDIAVLRRAL
HAMDRRLDAA WAQRAPDTPL QSADQALILA SIVEKETGRA EDRAQIAGVF SNRLRVGMLL
QTDPTVIYGL GEKFDGNLRR RDLTADTPYN TYTRAGLPPT PIAMPGKAAL LAAVQPAPTK
ALYFVARGDG SSHFSSTLQD HNRAVNRYQR GQK