| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1692 |
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| Symbol | |
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| ID | 4672978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1759177 |
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| End bp | 1760535 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639838782 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_985959 |
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| Protein GI | 121594063 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.183372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCC GGCCGCAGCC GGCGCACACG GCCCACGGCA GCCGTTACAA CCAAGGGTCG
CATTCACCCG GCCCCACGCC CGTCGCTCCC ATGTCCTCTC AAGATTCCTC ACCGGCCCGC
TGGTACTTCG GCTGGAACAT CGTGGCCGCG GCCACCGTGC TCACCGCCCT CACCGTGGGC
CTGCGCCTGG GGCTGGGCCC TCTGTTCCTG CCCATGGCCG AGGACCTGGG CTTTTCGCGC
AGCCTGCTGT CGTCCATCGT CGCCGTGGGC ATGCTGTGCT ACGGCGCGGC CATGCCGCTG
GCGGGCTGGC TGGTGGCGCG CCGGGGCACA CGCTTCGTGC TGTTGGCGGG CACGGTCCTG
CTGGTGGCGT CGACACTCTG GGCAGTGAAC ACGCGCACGC CGCTGGGGCT GCTGCTGAGC
TTCGGCATCC TCATGTCCGT GGGCGCGGGA TTCACCAGCC CGGTGGCGCT CACGCCGGTC
ATCAGCCGCT GGTTCAACCG CCGCCGGGGC ATGGCGCTGT TCTTCTTGTC CACGGGCTCC
ATGGCCGGCA TCGCCATCAT GACGCCCGCG CTGGGCATGG CGCTGCAGCA TCTGAGCTGG
CAGGCCACGC TGCTGGGCTT TGCCGCGCTG TTCACCGCCA TCACCGTCCC CACGGCGTTG
TGGGTGATCC GCGACGAGGC GCCTGCCGAT GGCGATGCCC CGCTGCCCGG CAGCCCCATT
CGTGCGGCGA ACCCGATGGC TCCCGCAGGG CAGCACTACA CGGTGCTGCA GGCCATGCGC
ACCGGCACCT TCCTCAAGAT CACGCTGGGC CTGTTCGCCT GCGGCTTCAG CATGAACCTG
CTGGGCACGC ACGGCATGCC CATGCTGATG GACCATGGCT TTGACGCCAC CACCAGCGCC
TTCGGCATCG GCCTGATCGG GCTGGTGGCC ATTCCCAGCA CCATGGTGCT GGGGCGCCTG
GCCGACCGGC TGCCGCGACG CAAGCTGCTG GCCGCCATCT ATTGCGTGCG CGGCGTGGGG
TTCTTCGCGC TGCTGCTGGC GGGCAATACC CTGGAGCTGT ACGGCACCTC GGTGATCGGC
GGCATTGCCT GGGCGGGCAG CATCGCGCTG TCGTCCGCCA TCCTGGCCGA CATGTTCGGC
GTGCGGCTGG TGGGCGTGCT CTACGGCTGG GCCTACCTGG GGCATCAGGT GGGGGCCATG
ATCAGCGCCT GGCTGGGCGG CTGGGGCTAT GAGCATTTCG GCACGCACTG GATCGCCTTC
GGCCTGTCGG GCGCGCTGCT GATGGTGGCC GCGGGGGTGG CGTTGCTGCT GCCGGGGCGG
CGCCGCCCGG CGCTGCCCAC GCCCCAGGCG GCGGGCTGA
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| Protein sequence | MRRRPQPAHT AHGSRYNQGS HSPGPTPVAP MSSQDSSPAR WYFGWNIVAA ATVLTALTVG
LRLGLGPLFL PMAEDLGFSR SLLSSIVAVG MLCYGAAMPL AGWLVARRGT RFVLLAGTVL
LVASTLWAVN TRTPLGLLLS FGILMSVGAG FTSPVALTPV ISRWFNRRRG MALFFLSTGS
MAGIAIMTPA LGMALQHLSW QATLLGFAAL FTAITVPTAL WVIRDEAPAD GDAPLPGSPI
RAANPMAPAG QHYTVLQAMR TGTFLKITLG LFACGFSMNL LGTHGMPMLM DHGFDATTSA
FGIGLIGLVA IPSTMVLGRL ADRLPRRKLL AAIYCVRGVG FFALLLAGNT LELYGTSVIG
GIAWAGSIAL SSAILADMFG VRLVGVLYGW AYLGHQVGAM ISAWLGGWGY EHFGTHWIAF
GLSGALLMVA AGVALLLPGR RRPALPTPQA AG
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