| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1652 |
|---|
| Symbol | |
|---|
| ID | 4670924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1711239 |
|---|
| End bp | 1712297 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838741 |
|---|
| Product | ferrochelatase |
|---|
| Protein accession | YP_985919 |
|---|
| Protein GI | 121594023 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
|---|
| TIGRFAM ID | [TIGR00109] ferrochelatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.754306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.219302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCT CGCCTTCTCA CCATGCCGCC CAGACGGCCT CAGCCTCTTC GATCCAGACC
GCCGCAGCAC GCGAAAGCAC CGCCATTCTG CTGTGCAACC TGGGCACGCC AGACGCCCCC
ACCGCACCGG CGCTGCGCCG CTATCTGGCG CAGTTCCTGG GCGACCCGCG GGTGGTGGAA
ATTCCGCGGG CGCTGTGGCT GCCTCTGCTG TACGGGATCA TCCTGCGCAC GCGGCCGGCC
AAGTCGGCCG CCAAGTACGC CAGCATCTGG ACGGAAGAAG GCTCCCCGCT CGCCGTGTGG
ACGGCCAAGC AGGCGGTGAT GCTGCGCGGC TGGCTGGGCG AGGCCGGCCA GCCGGTGCGG
GTACTGCCCG CCATGCGCTA CGGTCAGCCG GCCATTGGTG CGCAGCTGCA GGTGCTGCAG
GACGCCGGCG TGCGCCGCGT GCTGGTGCTG CCGCTGTACC CGCAATACTC GGCCACGACC
ACCGCCAGCG TGTTCGACGA CGTGGCCGCG TGGGTGCGCC GCTCGCGTTG CTTTCCCGAA
CTGCGCTTCG TGAACGACTA CCACGACCAC CCGGACTACA TTGCCGCGCT GGCCCAGTCG
GTGCGCGCGC ACTGGCAGCG CGAGGGCGGC CCGGCGGACA AGCTGGTGAT GAGTTTTCAC
GGCATTCCCG AACGCAATGT GCGATTGGGC GACCCCTACG CGGAGCAATG CCGCAACACG
GCCCGGCTGC TCGCGCAGGC GCTGGGGCTG GGCGAAGACC GGTACCTGCT GACCTTCCAG
TCGCGCTTTG GCAAGGCCCG CTGGCTGGAG CCCTACACCG AACCCTCGCT GGTGGCGCTG
GCACAGGGCG GCACGCGCCG CGTGGACGTG ATGTGCCCAG GCTTCACCAG TGACTGCCTG
GAAACGCTGG AGGAGATCAA CCAGGAGGCA CGCGAGGCCT TCCTGCACGC AGGCGGCCAG
GACTTCCGCT ACATCCCCTG TCTGAACGAC AACCCCGCCT GGATCACCGC CTTGAGCCGC
ATTGCACAAC AGCACCTGGC GGGCTGGAGC CAGCCATGA
|
|---|
| Protein sequence | MPASPSHHAA QTASASSIQT AAARESTAIL LCNLGTPDAP TAPALRRYLA QFLGDPRVVE
IPRALWLPLL YGIILRTRPA KSAAKYASIW TEEGSPLAVW TAKQAVMLRG WLGEAGQPVR
VLPAMRYGQP AIGAQLQVLQ DAGVRRVLVL PLYPQYSATT TASVFDDVAA WVRRSRCFPE
LRFVNDYHDH PDYIAALAQS VRAHWQREGG PADKLVMSFH GIPERNVRLG DPYAEQCRNT
ARLLAQALGL GEDRYLLTFQ SRFGKARWLE PYTEPSLVAL AQGGTRRVDV MCPGFTSDCL
ETLEEINQEA REAFLHAGGQ DFRYIPCLND NPAWITALSR IAQQHLAGWS QP
|
|---|
| |