Gene Ajs_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1639 
Symbol 
ID4672386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1697572 
End bp1697997 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content72% 
IMG OID639838729 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_985907 
Protein GI121594011 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.290258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CACCCGATGC AATGCGCCTG GACAAATGGC TGTGGTGCGC GCGCTTCTAC 
AAGACCCGCA GCCTCGCCGT GGAAGAGATC GGCAAAGGCC GCGTAACCGT CAACGGCCAG
GCGGCCAAAG CCGCGCGTGA ACTGCGCGCG GGCGACACCG TCGCGCTGCG CCAGGGCGCG
GTAGCCCGCA CGGTCGTGGT GCGCGCCTTG AGCAACTTCC GCAGCCCGGC GCCCGTGGCG
CAGCAGCTCT ATGAGGAAAC GCCCGAGAGC CTCGCCGCGC GCGCGCAGGC CGCCGAAGCG
CGCCGCCTGG CGCCCGAGCC AGCCGCCGCG CTGCGCGAGG GCCGCCCCAC CAAGCGCGAC
CGCCGCTCCA TGGACCACCT GCGCCATGAC TGGGACGACC GCTGGAGCGC CTCCATCGAC
GACTGA
 
Protein sequence
MTTPPDAMRL DKWLWCARFY KTRSLAVEEI GKGRVTVNGQ AAKAARELRA GDTVALRQGA 
VARTVVVRAL SNFRSPAPVA QQLYEETPES LAARAQAAEA RRLAPEPAAA LREGRPTKRD
RRSMDHLRHD WDDRWSASID D