Gene Ajs_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1553 
Symbol 
ID4670983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1605739 
End bp1606461 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID639838640 
Productputative phage repressor 
Protein accessionYP_985822 
Protein GI121593926 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.559929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0333856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA GCCGCGTGGT GCGACGCTTG CCAATGGATC GGCGTGGAAG GCTGGAGGAC 
AGCCGCGCAG GGCGTTCTTC TGCAGAATCC ATCGAAGCCG ATCTCGATCT GATTCCTGGT
GTGCGCGACC GCCTGCAAGC CAGGCTGATC GCCATGGGCA TTCCCGCCGA CAAGACGGTT
TCGCATGTGG CCGGGATCAC GCAGCGCGCG GCCCAGAGCG TGCGTCGATG GTTCGATGCC
AGCGAGCCTG GTTTGCCGGA TCTGGAATCG TTCGCCCGGC TGTGCGCGGG TCTGGGCTGC
AGTGCGGACG AGATCATCGG CGCGCTGCGG GCCCACGCTG ACGACGAGGC TCACTGCGCC
CAGCTCATCG AGGTGGCCAA CTGCATCCAG GCCATCACCG ATTCTCTGGC CCACCATGGC
CAGCTGGGCA TTCCAATGCG GGTGCCCGGC GACGAAATGG CGCCCCATCT GAAGGCCGGT
GATCTGGTCT TCGTCGATTC GGCCGTGACG CAACTGGCTG GCAACGGAAT CTATGCGTTC
AACTGCAACG GCAGTCTGTA CATTCGGCGG GTGGAACGGC GCATGGATCG GAGCATCGTG
CTCAAGTGCG ACAACAAGGC CTACCAGGAC TACGAGTGGA CAGGAGCAAC AGCGGCCGCA
AGGCGCCGCG TGAAAGTCCT GGGCAAGGTG CGCAGCGCGA TCAGCGTGAA GGTGTTCACT
TGA
 
Protein sequence
MSSSRVVRRL PMDRRGRLED SRAGRSSAES IEADLDLIPG VRDRLQARLI AMGIPADKTV 
SHVAGITQRA AQSVRRWFDA SEPGLPDLES FARLCAGLGC SADEIIGALR AHADDEAHCA
QLIEVANCIQ AITDSLAHHG QLGIPMRVPG DEMAPHLKAG DLVFVDSAVT QLAGNGIYAF
NCNGSLYIRR VERRMDRSIV LKCDNKAYQD YEWTGATAAA RRRVKVLGKV RSAISVKVFT