Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1553 |
Symbol | |
ID | 4670983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1605739 |
End bp | 1606461 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838640 |
Product | putative phage repressor |
Protein accession | YP_985822 |
Protein GI | 121593926 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.559929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0333856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA GCCGCGTGGT GCGACGCTTG CCAATGGATC GGCGTGGAAG GCTGGAGGAC AGCCGCGCAG GGCGTTCTTC TGCAGAATCC ATCGAAGCCG ATCTCGATCT GATTCCTGGT GTGCGCGACC GCCTGCAAGC CAGGCTGATC GCCATGGGCA TTCCCGCCGA CAAGACGGTT TCGCATGTGG CCGGGATCAC GCAGCGCGCG GCCCAGAGCG TGCGTCGATG GTTCGATGCC AGCGAGCCTG GTTTGCCGGA TCTGGAATCG TTCGCCCGGC TGTGCGCGGG TCTGGGCTGC AGTGCGGACG AGATCATCGG CGCGCTGCGG GCCCACGCTG ACGACGAGGC TCACTGCGCC CAGCTCATCG AGGTGGCCAA CTGCATCCAG GCCATCACCG ATTCTCTGGC CCACCATGGC CAGCTGGGCA TTCCAATGCG GGTGCCCGGC GACGAAATGG CGCCCCATCT GAAGGCCGGT GATCTGGTCT TCGTCGATTC GGCCGTGACG CAACTGGCTG GCAACGGAAT CTATGCGTTC AACTGCAACG GCAGTCTGTA CATTCGGCGG GTGGAACGGC GCATGGATCG GAGCATCGTG CTCAAGTGCG ACAACAAGGC CTACCAGGAC TACGAGTGGA CAGGAGCAAC AGCGGCCGCA AGGCGCCGCG TGAAAGTCCT GGGCAAGGTG CGCAGCGCGA TCAGCGTGAA GGTGTTCACT TGA
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Protein sequence | MSSSRVVRRL PMDRRGRLED SRAGRSSAES IEADLDLIPG VRDRLQARLI AMGIPADKTV SHVAGITQRA AQSVRRWFDA SEPGLPDLES FARLCAGLGC SADEIIGALR AHADDEAHCA QLIEVANCIQ AITDSLAHHG QLGIPMRVPG DEMAPHLKAG DLVFVDSAVT QLAGNGIYAF NCNGSLYIRR VERRMDRSIV LKCDNKAYQD YEWTGATAAA RRRVKVLGKV RSAISVKVFT
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