Gene Ajs_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1370 
Symbol 
ID4674388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1437274 
End bp1438275 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID639838481 
Productcation diffusion facilitator family transporter 
Protein accessionYP_985663 
Protein GI121593767 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT CCCACTCTCA TCATGGTCAC AGTCATGACC ACGACCATTC GCACGCGCCG 
ACCGTCACCA GCACGAACGA GCGCAAGGTG CTGCTGTCCT TCGTCCTGAT CTTCACCTTC
ATGGTGGTGG AGGCGCTCGG CGGAGCCTTC TCTGGCTCCC TCGCCCTGAT GGCCGATGCA
GGCCACATGC TGACCGATGC GGCGGCGTTG GCCCTGGCCT ATGCCGCATT CCGGTTCGGC
CGGCGCGCTG CCGACAGCAA GCGCACCTTC GGCTATCTAC GCTTCGAGGT GATCGCCGGA
TTCGTGAACG CCGTGACGCT GTTCGCCATC GTGGGCTGGA TCGCATACGA AGCCTGGCAG
CGCTTCTTCG CGCCGCCTGA AATCCTGGCC GGCCCCATGC TGATCGTGGC CATCGTCGGC
CTGCTGGTCA ATTTCCTGGT GTTGTGGATC ATGACGCGCG GCGAGACCGA CCACGTCAAC
GTCAAGGGGG TCATCCTGCA TGTAATGGGC GACCTGCTGG GCTCGGTGGG CGCGATCGTC
GCTGCGATCG TGGTCTATTA CACGGGCTGG ACGCCCATCG ATCCCATCCT CTCGGTGGCC
GTGGCAGCAC TGATCCTGCG CAGTGCCTGG AAGCTGTTGG CCAAGTCGCT GCACATCCTG
CTGGAAGGCG CGCCCGAGGA CGCTTCTCCA GAGAAGGTGG AGCGTGGATT GCTGGGCGCC
GTGCCCGGCT TGGCGGCCGT CAGCCATGTC CATGTGTGGC AGCTCACCTC CGGCCGGACG
ATGGCAACGC TGCACATCCG TCCGCAGAGC GACGATGAAG CCAAGGCGGT GGTCAAGCTC
GTCAACAAGG CACTACGCGA GCAGTTCAAC ATCCAGCACG CCACCGTTGC GATCGACTGG
AACTCGGAGG TGGACGAGAA CGCCTGCAAT CTGCGCCAGA GTCCGGGGCG GCACGACCAC
GACCACGACC ACGATCACCC GGCGTTCGGT CACCGGCATT GA
 
Protein sequence
MSHSHSHHGH SHDHDHSHAP TVTSTNERKV LLSFVLIFTF MVVEALGGAF SGSLALMADA 
GHMLTDAAAL ALAYAAFRFG RRAADSKRTF GYLRFEVIAG FVNAVTLFAI VGWIAYEAWQ
RFFAPPEILA GPMLIVAIVG LLVNFLVLWI MTRGETDHVN VKGVILHVMG DLLGSVGAIV
AAIVVYYTGW TPIDPILSVA VAALILRSAW KLLAKSLHIL LEGAPEDASP EKVERGLLGA
VPGLAAVSHV HVWQLTSGRT MATLHIRPQS DDEAKAVVKL VNKALREQFN IQHATVAIDW
NSEVDENACN LRQSPGRHDH DHDHDHPAFG HRH