| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1346 |
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| Symbol | |
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| ID | 4674533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1414947 |
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| End bp | 1416617 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838457 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_985639 |
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| Protein GI | 121593743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG CCATCGACCT CACGCAGGTC AGCGAAGCCG ATTGGGCCAA GGCACGCGAC
CGACTCGCCG TGATCCGCCG TCTGGCCAAG GCCACCGAGC GCACGCGCGA GGACGTGGCC
CAGGCAGCCA GCCAGATCGG ATGCAGCGTC AGCTCGACCT ACGACCTGCT GGCACGCTAT
CTCGCCGCTC CGCAGTTGAC CAGCCTGCTG CCGCAGCAGC GTGGCCGCAA GCAAGGCAAG
TCGATGCTGG TGCCGGAGGT GGCCGCGATC ATTAATCAGG TCACGGAGGA CATGTACCTG
ACGCGGCAGA AGCCGCGGGT GTCTGATCTG GTCGCGCAAG TCCATATACG ATGCCGAGCG
GCGGGCCTGG CGCTGCCCAG CCGGGGAGCG ATCGAGCGCC GGCTGAGTGC CCGTCCGGCT
TCGGAGGTGA CGGCCCAGCG TCACGGCCGC AAGGCGGCGC GTGATCGGTT TGCGCCGACA
ACCGGGTCGC TGGAAGCGCC CTGGCCGCTG TCGCTGGTGC AGATCGACCA CACGCTGGTC
GATGTGATCG TGGTGGACAG CCAGACGCGC GAGCCGATCC AGCGGCCCTG GCTGACGCTC
GCCATCGACG TCTGCACGCG CTGCGTGGCC GGCTTGCACC TGTCGCTGGA GCCTCCATCG
GCGACGTCGG TGGCGCTGTG CATCAGCCAG GCCGCATTGC CCAAGGATGC CTGGCTGGCC
GAGCGCGGGA TCGACGGGGC CTGGCCTGTG CATGGCATCC CCGAACGCCT GCATCTGGAC
AACGCCAAGG AGTTCCGCTC CGAGGCGCTG CGGCGCGGTT GCGAGCAGCA TGGCATCGCC
ATCGACCATC GGCCGGTGCG CACGCCACAT TACGGCGGCC ACATCGAGCG CCTGATCGGC
ACGATGATGG GCAAGGTCCA CCTGCTGCCG GGAACGACCT TCTCCAACGT GCAGGCCAAG
GGCGACCTCG ATCCTTCCAA AAGCGCCGTG ATGACCCTGG AAGAAGTCGA GCGGTGGCTG
GGGCACGCCA TTGCCGGCGT GTATCACCGC GAAGTACATC GGGGGCTGGG CATGCCGCCG
CTGGTAGCCT GGGAGAAAGG CATCTCGGGC GACGATCAGG TTCTCGGCCG TGGCAGTCCG
ACGACGGTGA GCGATCCACG GCGCTTCCTG ATCGACTTCC TGCCAATCGC CCGGCGCCTC
GTGCGGCGCG ATGGCGTGTC GCTGCACTCC ATCGGCTACT GGTCGGACGT GCTGTCCACC
TGGATCGGGC ATGCCGAACC GATGATCGTC CGCTTCGATC CGCGCGACCT GAGCCGCATC
TATCTGCTGG GGCCGGACGG AACCTACTAC GACCTGACCT ACCGTGACTT GCGACGCCCG
CCGATCAGCC TGTGGGAACA CCGGGCTGCG CTCAAGCGAC TGCGCGAGCA AGGCCATGCG
CATGTCGATG AAGCCGCGAT CTTCCGCGCG GTGCAAGCCA TGCGCGAGAT CGCTGACCAG
GCAGCGCACA CCAGTAAAAC CGCACGCCGG CAAAAGGAGC GTCGGCGTAT GGTCCAACAA
AAGCAGGCAG TCGTCGCACC GGCAGCTTCC GCTCCTGTGG AAACCAACGA CCTTCCTGCG
AACGGGCAAC AGCCGCATGA GCAGATGTTC CCGTTCGAGG AGTGGAATTG A
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| Protein sequence | MTAAIDLTQV SEADWAKARD RLAVIRRLAK ATERTREDVA QAASQIGCSV SSTYDLLARY
LAAPQLTSLL PQQRGRKQGK SMLVPEVAAI INQVTEDMYL TRQKPRVSDL VAQVHIRCRA
AGLALPSRGA IERRLSARPA SEVTAQRHGR KAARDRFAPT TGSLEAPWPL SLVQIDHTLV
DVIVVDSQTR EPIQRPWLTL AIDVCTRCVA GLHLSLEPPS ATSVALCISQ AALPKDAWLA
ERGIDGAWPV HGIPERLHLD NAKEFRSEAL RRGCEQHGIA IDHRPVRTPH YGGHIERLIG
TMMGKVHLLP GTTFSNVQAK GDLDPSKSAV MTLEEVERWL GHAIAGVYHR EVHRGLGMPP
LVAWEKGISG DDQVLGRGSP TTVSDPRRFL IDFLPIARRL VRRDGVSLHS IGYWSDVLST
WIGHAEPMIV RFDPRDLSRI YLLGPDGTYY DLTYRDLRRP PISLWEHRAA LKRLREQGHA
HVDEAAIFRA VQAMREIADQ AAHTSKTARR QKERRRMVQQ KQAVVAPAAS APVETNDLPA
NGQQPHEQMF PFEEWN
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