| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1329 |
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| Symbol | |
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| ID | 4674689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1394934 |
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| End bp | 1398053 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838440 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_985624 |
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| Protein GI | 121593728 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.039425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.381421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGT GGCTACTCGA CAACAGCCTG ACGAACCGGC TGCTGGTGAT CATCGCCAGC
GTCGTTCTGA TGGCCTACGG CGCGTTCACG CTCTCGCGCA CCCCGGTGGA CGTGTTCCCC
GACCTCAACA AGCCGACCGT CACCATCATG ACCGAGGCCG GCGGCATGGC CGCCGAGGAG
GTGGAGCAGC TCATCACCTT CCCGCTGGAG ACGACCATGA ACGGTCTGCC CGGCGTCGAA
AGCGTGCGCT CGACCTCGTC GGCCGGCCTG TCCTTCCTCT ACGTCACCTT CGACTGGAGC
ACCGACATCT TCCGCGCCCG GCAGCTGGTG TCGGAGCGGC TGTCCTCGAT GGAGGAAGGC
ATCGCCGAAG GCGTGGTGCC GCGCATGGGC CCGATCAGCT CGATCATGGG CGAGATCATG
CAGATCGCCA TTCCGGTCGA TCCGAGCAAG ATCAGCCCGA TGGCGGTGCG CGAGTACGCC
GACTGGGTGC CTCGACCGCG CCTGCTCTCG GTGCCAGGCG TCGCGCAGGT CATCCCGATC
GGCGGCGAGG TGCGGCAGTT CCAGGTGCAG CCGAACACCG CGCGCATGGC CGAGCTGGGC
ATCACGCACG ACCAGCTCGA AAGCGCGCTC AAGGGCTACT CGTCGAACAC CTCGGGTGGC
TTCCTGGAGC TGAACGGCCG CGAGTACCTG ATCCGCAACC TCGGCCGCAC GTCCCGGCTC
GACGACCTGA AGAACCTCGC GCTCGCGGCC AAGGGCGGCC AACCCATCCT CCTGCGCCAG
ATCGCCGAGG TCACGTTCGC CGCGGCACTC AAGCGCGGTG ACGCAGGATT TGAGGGCAAG
CCGGCGGTGA TCCTGGGCAT CCAGAAGCAG CCGACTGCCG ACACCATCGC GCTCACCAAG
TCCATCGAAG ACGCCCTCGT CGGACTGAAG GCTTCGCTGC CGGCCGGCAT GGAGGCGCCT
CGCGTCACCT TCCGTCAGGC CAGCTTCATC GAGGCCTCGA TCACGACGCT GCAGGGCAAG
CTGATCGGCG CCTCGATCTT CGTCGCGGTG ATCCTGTTCT TCTTCCTCGG CACCTTGCGG
CCGACCGTCA TCGCGCTGAC GGCCATTCCG GTATCGATCT TCATCACCGC TCTGGTCTTC
AAGTACTTCG GCCTGTCGAT CAACACGATG ACGCTGGGCG GCCTGGCCAT CGCCATCGGC
GGTCTCGTCG ACGATGCGGT GGTGGGTGTC GAGAACGTGC TGCGGCGGCT GAAGGCCGAC
CGGGCCAACC ATCCGCACAG CCGGCTGCAC CTGATCGAGA TCGTCGCGCA CGCGACGATG
GAAGTGCGAT CGGCCATCCT CTATGCGACG GTCATCATCG TGCTCGTCTT CATCCCGCTG
TTTGCACTGC CGGGGCTGGA GGGCAAGCTG TTCGTGCCGC TGGGCATCGC CTTCATCGTC
TCGACGCTGG CTTCGCTGAT CGTCTCGGTG ACGGTGACGC CGGTGCTCAG CTTCTACCTG
CTGCCGCGGA TGAAGAACCT GGACCACGGT GACACCAAGG TCCTGGCCTG GCTGAAGGCA
CGCTACCGCA GCGGCCTGCA GGGCGTGCTG GACCGGCCCA AGGCCGCCAT GGCGGCGGCC
GGTGCGGCCG TGCTGGTGGC CGCAGTGGCG GTGCCGTTCT TCCCGACGAC CTTCCTGCCG
CCGTTCAACG AGGGCACGCT GCTGATCGGC CTGCGCCTGA ACCCGGGTGT CACCTTGACG
GAGTCGTCGG CCTTGGCACG CCAGGCCGAG GTACTGGTCA AGCAGGTGCC CGAGGTGACG
CACGTCGGTC GCCGCAGCGG CCGGGCCGAG CTGGACGAAC ACGCGGAAGG CGTGCACGTC
AGCGAGCTCG ACGTGGGCCT CAAGCCCACC GCCGAGCTGA CGCGCAGCAT GGACGAGATC
AAGGCCGACA TCCGCAAGCG CCTGATCAAC CTGCCGGCTG CGCTGGAGAT CGGCCAGCCC
ATCTCGCACC GCATCGACCA CATGCTCTCG GGCGTGCGCT CGCAGATCGC GATCAAGATC
TTCGGCGAGG ACCTCGACGC GCTGCGAGGC CAGGCAGATG CCCTGCGGGC CAAGCTGGCC
ACGATCCCAG GCATCGCCGA CCTGCAGATC GAGAAGCAGG TGCTGGCGCC GCAGATCAAG
GTGCGCATCG ACTACGCCGC CGCGGCGCAG TACGGCGTGC CGGCGCCGCA GGTGCTCTCC
GCATTGCAGG CGCTGGTCGA GGGGGAGAAG GTCACCCAGA TCGTCGAGGG AGGCCGGCGC
TTCGCACTCG TGGTCAAGCT GCCCGAGTCG GCGCGTTCGG TCGAAGGCCT GGGCCAGATC
CTGATCGAGA CGCCGAACGG GCGCATCCCG CTGTCGAAGA TTGCGGCGAT CGAGGACGGC
GACGGCCCCA ACCAGATCAG CCGTGACGAC GGCAAGCGGC GCATCGTGCT GTCGGCCAAT
GCGTCCGGGC GCGCGCTGTC GGAGATCGTG GCCGACATCC GCAAGGTGGT GGCCGAGACG
AAACTGCCCG AGGGCTACTT CATCACCCTG GGCGGCCAGT TCCAGGCCCA GGAGGAGGCC
TCGCGGCTCG TCGGCCTGCT GTCCATCGTG TCGCTGACGC TGATGTTCGT GGTGCTCTAC
AGCCGCTACA AGTCGGCGGC GCTGTCGGCG CTGATCATGG TGAACATCCC GCTGGCGCTG
GTGGGCGCAG TCATCGGCCT GTGGCTGTCG GGCCAGCCAC TGAGCGTCGC CGCTCTCGTC
GGCTTCATCA CGCTGGCCGG CATCTCGGTA CGCAACGGCA TCCTGAAGGT CAGCCACTAC
ATCAACCTGA TGCGCTTCGA GGGCGAGTCC TTCGACCAGA AGATGATCCT GCGCGGCTCG
CTGGAGCGGC TGAGCCCAGT GCTGATGACC GCGCTGGTCA CCGCCTTTGC GCTGGCCCCG
CTGCTGTTCG AGGCCGAGCA ACCCGGCACC GAGGTGCTGC ACCCGGTGGC CGTAGTGATC
TTCTCCGGCC TCATCAGCTC GACCCTGCTC GACACCTTCC TCACGCCCGC GATGTTCTGG
CTCTTCGGGC GCAAGCCGGC CGAAGCGCTG ATGGACGACA AGGACGCCGA GGCGCTTTGA
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| Protein sequence | MFKWLLDNSL TNRLLVIIAS VVLMAYGAFT LSRTPVDVFP DLNKPTVTIM TEAGGMAAEE
VEQLITFPLE TTMNGLPGVE SVRSTSSAGL SFLYVTFDWS TDIFRARQLV SERLSSMEEG
IAEGVVPRMG PISSIMGEIM QIAIPVDPSK ISPMAVREYA DWVPRPRLLS VPGVAQVIPI
GGEVRQFQVQ PNTARMAELG ITHDQLESAL KGYSSNTSGG FLELNGREYL IRNLGRTSRL
DDLKNLALAA KGGQPILLRQ IAEVTFAAAL KRGDAGFEGK PAVILGIQKQ PTADTIALTK
SIEDALVGLK ASLPAGMEAP RVTFRQASFI EASITTLQGK LIGASIFVAV ILFFFLGTLR
PTVIALTAIP VSIFITALVF KYFGLSINTM TLGGLAIAIG GLVDDAVVGV ENVLRRLKAD
RANHPHSRLH LIEIVAHATM EVRSAILYAT VIIVLVFIPL FALPGLEGKL FVPLGIAFIV
STLASLIVSV TVTPVLSFYL LPRMKNLDHG DTKVLAWLKA RYRSGLQGVL DRPKAAMAAA
GAAVLVAAVA VPFFPTTFLP PFNEGTLLIG LRLNPGVTLT ESSALARQAE VLVKQVPEVT
HVGRRSGRAE LDEHAEGVHV SELDVGLKPT AELTRSMDEI KADIRKRLIN LPAALEIGQP
ISHRIDHMLS GVRSQIAIKI FGEDLDALRG QADALRAKLA TIPGIADLQI EKQVLAPQIK
VRIDYAAAAQ YGVPAPQVLS ALQALVEGEK VTQIVEGGRR FALVVKLPES ARSVEGLGQI
LIETPNGRIP LSKIAAIEDG DGPNQISRDD GKRRIVLSAN ASGRALSEIV ADIRKVVAET
KLPEGYFITL GGQFQAQEEA SRLVGLLSIV SLTLMFVVLY SRYKSAALSA LIMVNIPLAL
VGAVIGLWLS GQPLSVAALV GFITLAGISV RNGILKVSHY INLMRFEGES FDQKMILRGS
LERLSPVLMT ALVTAFALAP LLFEAEQPGT EVLHPVAVVI FSGLISSTLL DTFLTPAMFW
LFGRKPAEAL MDDKDAEAL
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