Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1208 |
Symbol | tig |
ID | 4672882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1281785 |
End bp | 1283095 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639838331 |
Product | trigger factor |
Protein accession | YP_985516 |
Protein GI | 121593620 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.774051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAA CTGTTGAAAC CCTTGAAAAG CTTGAGCGTA AGATCACGCT GAGCTTGCCC CTGACCACGA TCCAGACCGA AGTGGACGCG CGCCTCAAGC GCCTGGCCCG TACGGTGAAG ATGGATGGTT TCCGTCCCGG CAAGGTCCCC ATGAGCGTAG TGGCTCAGCG TTATGGCTAT TCGGTGCAAT ACGAAGTGCT GAACGACAAG GTGGGCGAGG CGTTTGCACA GGCCGCCAAT GAAGCCAACC TGCGCGTGGC AGGCCAGCCG CGCATCACGG AGAAGGACGG CGCGCCTGAA GGCGAAGTGA CTTTCGACGC TGTGTTCGAG GTGTTCCCCG AGGTCAAGAT CGGCGATCTG TCCACCGCGG AAGTCGAGAA GCTCTCCGCC GAAGTGACCG ACAGCGCTAT CGACAAGACC GTGGACATCC TGCGCAAGCA GCGCCGTACC TTCGCGCAGC GTGCCCTGGC CGCTGCTGCT GAAGACGGCG ATCGCGTGAC GGTGGATTTC GAGGGCAAGA TCGACGGCGA GCCCTTCCAG GGCGGCAAGG CCGAGGACTT CCAGTTCCTG GTGGGCGAAG GCCAGATGCT CAAGGAATTC GAAGACGCAG TGCGCGGCAT GAAGTCGGGC GAGAGCAAGA CCTTCCCCCT GGCCTTCCCC GAGGACTACC ACGGCAAGGA CGTGGCTGGC AAGACGGCCG ACTTCATGGT CACCGTCAAG AAGATCGAAG CGGCCCACCT GCCCGAAGTG AATGAGCAAC TGGCCAAGTC GCTCGGCATT GCCGACGGCA CGGTGGAAGG CTTGCGCGCC GACATCAAGA AGAACCTGGA GCGCGAAGTC AAATTCCGCC TGCTGGCCCG CAACAAGCAA GCCGTGATGG ACGCTCTGGT GTCCAAAGCG GAACTGGATC TGCCCAACGC CAGCGTGCAG GCTGAAATTG CCCGCCTGCT GGAGGCTGCA CGCGCCGACC TCAAGCAGCG CGGCATCAAG GACGCCGACA AGGCCGAAAT CCCCGAGGAC GTGTTCCGCC CTCAGGCCGA GCGCCGCGTG CGCCTGGGCC TGGTGGTCGC CGAACTCGTG CGTGCCAATA ACCTGCAGGC CAAGCCGGAG CAGCTGAAGG CCCACGTGGA CGAGCTGGCC GCCAGCTACG AGAAGCCTGA GGACGTGGTG CGCTGGTACT TCAGCGACCG CAATCGCCTG GCTGAGGTGG AAGCCGTGGT CATCGAGAAC AATGTGACCG ACTTCGTGCT GGGCCAGGCC AAGGTGAACG ACAAGGCCGT GTCCTTCGAT GAACTGATGG GCCAGGCCTG A
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Protein sequence | MAVTVETLEK LERKITLSLP LTTIQTEVDA RLKRLARTVK MDGFRPGKVP MSVVAQRYGY SVQYEVLNDK VGEAFAQAAN EANLRVAGQP RITEKDGAPE GEVTFDAVFE VFPEVKIGDL STAEVEKLSA EVTDSAIDKT VDILRKQRRT FAQRALAAAA EDGDRVTVDF EGKIDGEPFQ GGKAEDFQFL VGEGQMLKEF EDAVRGMKSG ESKTFPLAFP EDYHGKDVAG KTADFMVTVK KIEAAHLPEV NEQLAKSLGI ADGTVEGLRA DIKKNLEREV KFRLLARNKQ AVMDALVSKA ELDLPNASVQ AEIARLLEAA RADLKQRGIK DADKAEIPED VFRPQAERRV RLGLVVAELV RANNLQAKPE QLKAHVDELA ASYEKPEDVV RWYFSDRNRL AEVEAVVIEN NVTDFVLGQA KVNDKAVSFD ELMGQA
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