| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1165 |
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| Symbol | |
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| ID | 4672225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1230032 |
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| End bp | 1231375 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838282 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_985473 |
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| Protein GI | 121593577 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG AATCTCACAA GGATCCGGAC TCCATGGCGG GTCACTCGCC TTCGCCCGCA
TCGGAGGCTG CTGCGCCGCG CAGGCCCCGC AAGCGCAAGT CTGCGGAAGG CGCGCTTCAG
GAGAATGTGG CAGTGCCGCA ACTTAGTGGT GCTGACGGTG CCCAATCGGA CGTGAAGATG
CAGGAAGTGC ATGAGCAAGG CGCTGCTGTT GAGGTGCCAC GACAGCCCAG CGGCCATGCC
GCCAAGCGCG CGCCGAAGGG CGATGGCTAT CAGTTTGCCG ACGTGGTGTC GGGTCAGTTC
GACGAGGATG AAGCCAACGC CGAGCTCGCC CCCGCCAAGC GGGTGCTGCT TCCCCAGCCA
GAAACCCCCA AACTGCACAA GGTGCTTGCC CAGGCGGGCA TGGGGTCTCG GCTGGAAATG
GAGCAGCTCA TCCTGGAAGG TCGTATTTCC GTCAACAACG AGCCGGCCCA TATCGGGCAG
CGCGTGCAGT TTGGGGACCA GATAAAGGTC AACGGCAAGC CCATCCGCTT CCGTATTGCA
CCACCGCCGG TACGCGTGAT TGCATACCAC AAGCCGGTGG GCGAAGTGGT CACGCATGAC
GATCCGCAAA ACCGCCCCAC GGTGTTTCGC AAACTCCCCC GGCTGCAGCA GGGCAAATGG
CAATCCGTCG GGCGGCTGGA CCTGAATACC GAAGGTTTGT TGCTATTCAC CAGTTCGGGG
GAGCTTGCGA ACAAGTTGAT GCACCCCCGC TTCGGGCTGG AGCGTGAATA TGCGGTCCGC
GTGTTGGGTG CGTTGAGCAC CGAGGAAAAG CAGCGCTTGC TGGAAGGCGT GCCGCTGGAG
GATGGCATGG CTTCCTTTGG CTCCGTGGAA GACGGCGGCG GCGAGGGCGC CAACTGTTGG
TACCGGGTCA CCATCTCTGA AGGCCGTAAC CGCGAGGTCC GCCGTATGTT CGAGGCGGTA
GGGCATGCGG TGAGCCGGCT GATTCGGATT CGCTACGGGG CCATGATGCT GCCGCGCGGG
CTCAAGCGCG GGGCATGGCT GGAGCTTGAT GAGCGCGACA TTCGTGCCCT GATGCAGGCG
GCAGGTGCAA CGCTGGATGG TGGTGGTGCG CGTCCCACTA GTGGCCAGGG CAGGGGCGGC
CGCAAAGGCG ATCGTCGATC CGCGGGGCCG GGCAAGGCAT CTGGCAGTGG GCGTGACAAG
ACGGGGGGGC GTGCGGGGCG ACCGCCCTCA CCGAATGCCC AGCCGGACCC GATGAAGACG
TCGCTTGGCT ATATTGGGGC CGACAGTTTC TCGCGCCATC GCCAACAGCA ACGCAACAAC
GGGCCGCGCC GCGGCGGACG TTAG
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| Protein sequence | MNDESHKDPD SMAGHSPSPA SEAAAPRRPR KRKSAEGALQ ENVAVPQLSG ADGAQSDVKM
QEVHEQGAAV EVPRQPSGHA AKRAPKGDGY QFADVVSGQF DEDEANAELA PAKRVLLPQP
ETPKLHKVLA QAGMGSRLEM EQLILEGRIS VNNEPAHIGQ RVQFGDQIKV NGKPIRFRIA
PPPVRVIAYH KPVGEVVTHD DPQNRPTVFR KLPRLQQGKW QSVGRLDLNT EGLLLFTSSG
ELANKLMHPR FGLEREYAVR VLGALSTEEK QRLLEGVPLE DGMASFGSVE DGGGEGANCW
YRVTISEGRN REVRRMFEAV GHAVSRLIRI RYGAMMLPRG LKRGAWLELD ERDIRALMQA
AGATLDGGGA RPTSGQGRGG RKGDRRSAGP GKASGSGRDK TGGRAGRPPS PNAQPDPMKT
SLGYIGADSF SRHRQQQRNN GPRRGGR
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