Gene Ajs_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1159 
Symbol 
ID4671844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1224575 
End bp1225549 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID639838276 
Productalcohol dehydrogenase 
Protein accessionYP_985467 
Protein GI121593571 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0429235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCT GGCTCTGCAC CAACCCCATC GGCGTCGAGG CCCTGGCCTG GACAGAACTG 
CCCGACCCGG CTCCCAAGGC AGGCGAGGTC CTCGTCGAGA TCCGCGCGGC AAGCCTGAAT
TTTCCCGACC TGCTGATGGT GCAGAACAAG TACCAGATCA AGCCCCCCCT GCCTTTCGTG
CCCGGCTCGG AGTTCGCGGG CGTCGTGCAG GCCGTGGGCG ACGGCGTCAG CCATCTGCAG
GTGGGTCAAA ACGTGGCCTG TCTCAGCGGC ACGGGTGGTT TCGCCACGCA CACCATCGCC
CCGGCCGCAC GCTGTATACC CCTGCCGGAC GGCTTTGGCC ATGTGGATGC GGCGGCATTC
ATCATGACTT ATGCAACCTC TTACCACGCC CTGCTGGACC GGGGCCAGCT CCAGGCTGGC
GAGACTGTGC TGGTGCTGGG CGCGGCTGGC GGCGTGGGCA CCGCCGCGAT TCAGATCGCC
AAGGCCAAGG GAGCGCGCGT GATCGCCGCC GCCTCCACGG ACGAAAAATG CGACGTGTGC
CTGAAGCTGG GCGCCGATGC CGTGATCAAT TACAGCGTGG AGGACCTGCG CGACGCCGCC
AAGTCACTGA CCGATGGGCG GGGACCGGAC GTCATCTACG ACCCGGTGGG CGGCGCACTG
GCAGAGCCCG CATTTCGCTC CATCGCCTGG CGAGGCCGCT ATCTGGTGGT CGGCTTCGCA
TCGGGCCCCA TCCCTTCATT GCCGTTGAAT CTGCCACTGC TCAAGGGTGC TTCGGTCGTC
GGCGTGTTCT GGGGCGAATT CGCCAAGCGC GAGCCCCAGG CCAATGCTTC GATGATGGGC
ACCCTGCTCC AGTGGTATGC ACAGGGCAAG ATCAGGCCCG CCATCGACCG AACCATGCCC
ATGTCACAGC TACCCGCCGC GTTTGCCCAC ATGGGCGCAC GTGCGGTGAT CGGGAAACTG
GTTCTGGTCA ACTGA
 
Protein sequence
MHAWLCTNPI GVEALAWTEL PDPAPKAGEV LVEIRAASLN FPDLLMVQNK YQIKPPLPFV 
PGSEFAGVVQ AVGDGVSHLQ VGQNVACLSG TGGFATHTIA PAARCIPLPD GFGHVDAAAF
IMTYATSYHA LLDRGQLQAG ETVLVLGAAG GVGTAAIQIA KAKGARVIAA ASTDEKCDVC
LKLGADAVIN YSVEDLRDAA KSLTDGRGPD VIYDPVGGAL AEPAFRSIAW RGRYLVVGFA
SGPIPSLPLN LPLLKGASVV GVFWGEFAKR EPQANASMMG TLLQWYAQGK IRPAIDRTMP
MSQLPAAFAH MGARAVIGKL VLVN