| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1142 |
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| Symbol | |
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| ID | 4671839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1201623 |
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| End bp | 1202711 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838260 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_985451 |
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| Protein GI | 121593555 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0809507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.548232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAG ATCGGTGCAT GCCGGCGGTA GGCAACCGGT GGACGCGGCG GCGCTTCGCC
CTTGCGCTGC CGTTGCTGGG CGCGCTGGCG TACCTCGACC CGCGCCAGGC TTTGGCTGGC
ATGGTGGAGG GCGCGCAGCC CCTGGTGCGC GCGAGCCGTA CCCTCATGGG CACACGCGTG
GACATCGCGG CTGCCGTTGG CAATGGCCGC GATGCCGACG CTGTGCAGCA GGTGATGCTG
CACGCGTTCG CGGAAATGGA GCGCCTGGAG GCGCTCATGA GCCGTTACCG GGAGGGCGGC
GACGTGGCGC GCCTCGGCGC GGCCGCCGGC CGGCATGCCG TGCACGTGGC CCCGGAAGTG
ATGCAGGTGC TGCGCACGGC GCGTCGCCTG CACCAAGAAA GTGCTGGCGC CTTCGATCCC
ACCATCGGTG CACTGCGGGG CTGGCATTTT GAACCCGGCC ACGAAGCCGC GCCGGCACCT
GAGGAGATCG CTCAGGCGCT GCGTTTGGTG AACGCGCGCC ACCTCGTGCT GGACGAGCGC
GCAGGAACGG CCTACCTTGC GCGGACGGGC ATGGGGTTGG ATCTGGGCGG CGTGGCGAAG
TTACCCATTC TGCAAGCGGG CTTGCAAGTG CTGGAACGCG CCGGTGTCAC GGATGCTCTG
GTCAACGGCG GTGGCGATGT CCTGGTCATG GGCCGGCAGC ACGACCGTCC CTGGCGTGTG
GGCGTGCGCA ATCCCTCCGC TCCGGCGCAG CTGCTGGGCG TACTGGAGCT GCAAGGGCGC
GGCGTGGTGG CATCGTCCGG CGATTACGAG CGAGGCTTCT TGCGTGCAGG ACGCCGCCTG
CACCATGTGC TCAACCCCCG CACGGGTTGG CCTACGGAAG GTGTGTCTGG CGTGGCGCTC
ATGGCCGAGC GTATCGAAGA CGTCAACGGC TGGGGCACGG CGCTGATGGT CCAAGGACCT
GCGGCAGCAC CTGCATGGCA TGCGGGCCAC GCACATGTCG AAGCCCTCGT GGCGAGCGCG
GATGGCACGC GCTGGAGCTC CCCTGGCATG CTCGCCGCGC TGCGGCCAGT GCCTGCGCGC
GCAGCATGA
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| Protein sequence | MNSDRCMPAV GNRWTRRRFA LALPLLGALA YLDPRQALAG MVEGAQPLVR ASRTLMGTRV
DIAAAVGNGR DADAVQQVML HAFAEMERLE ALMSRYREGG DVARLGAAAG RHAVHVAPEV
MQVLRTARRL HQESAGAFDP TIGALRGWHF EPGHEAAPAP EEIAQALRLV NARHLVLDER
AGTAYLARTG MGLDLGGVAK LPILQAGLQV LERAGVTDAL VNGGGDVLVM GRQHDRPWRV
GVRNPSAPAQ LLGVLELQGR GVVASSGDYE RGFLRAGRRL HHVLNPRTGW PTEGVSGVAL
MAERIEDVNG WGTALMVQGP AAAPAWHAGH AHVEALVASA DGTRWSSPGM LAALRPVPAR
AA
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