Gene Ajs_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1080 
Symbol 
ID4671177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1135067 
End bp1136626 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content66% 
IMG OID639838199 
Productmalonyl-CoA synthase 
Protein accessionYP_985391 
Protein GI121593495 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.261639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCT CCTCCCAGAA CCTGTTTTCC GCGCTGCGCG CCGCCTTTCC TGCTGACCTG 
GACCAGACCG CCGTCGAGGC CGCCTCGGCC GCGGGTGCGC CGCTGCTCTA CACCTGGCGC
GACCTGGACC GCGCCAGCGC CCGCATCGCC AACCTGCTGG CATCGCTGAA GCTGCCCGAG
GGCAGCCGCA TCGCCGTGCA GGTGGAAAAG TCGGTCGAAG CCATGCTGCT GTACCTGGCC
ACGCTGCGCG CCGGCTACGT GTTCCTGCCG CTGAACACCG CCTACCAGAG CGCAGAGATC
GAGTACTTCA TCGGCAATGC CGAGCCGGCC GTGGTGGTCT GCACGCCAGG CAACTTCGGC
TGGGTGTCGA AGATCGCCTT TACTGCCGGC ACGCAACATG TGTTCACGCT GGGCGACGAC
CGCACCGGCA GCCTGCTGGA GCGCGCCGCG CACTTCGGCG ACGAGCACCG CGCCGTCCCG
CGCAAGGCTG ACGACCTGGC TGCCATCCTC TACACCAGCG GCACCACGGG ACGCAGCAAG
GGCGCGATGC TCACGCATGG CAACCTGCTG TCCAATGCCC AGGTGCTCAA GGACTACTGG
GGCTGGAAGC CCGGCGACGT GCTGATCCAC GCGCTGCCCA TCTTCCACGT GCACGGCCTG
TTCGTGGCCA TCCATGGTGC GCTGATCAAT GGCAGCAAGA TGATCTGGAT GGCGAAGTTC
GACCCCAAGG CGGTGATCGC CGCCATGCCG CGCGCCACGG TGTTCATGGG CGTGCCCACG
CTCTACGTGC GCATGCTGGC CGAGCCGGCG CTGACCCAGG CCGCGGCCAG CCACATGCGG
CTGTTCATCG CGGGCTCGGC GCCGCTGCTC ATCGAGACTT TCAAAGAATG GCAGGACCGC
ACGGGCCACA CCATCCTGGA GCGCTACGGC ATGAGTGAGA CCATCATGCT CACCAGCAAT
CCCTACGCGG CCGACGCGCG CCATGGCGGG CAGGACGAGC GCCGCGGCTC CACCGTGGGC
TTTCCGTTGC CCGGCGTGGG CCTGCGCGTG GTGGACGATG CCGGCAAGCC GGTGCCCGTG
GGCGAGATCG GCAACATCCA GGTCAAGGGC CCCAACGTGT TCAAGGGCTA CTGGCGCATG
CCCGAGAAGA CCAGGGAAGA GTTCAGCGCC GACAGCTGGT TCAAGACCGG CGACGTCGGC
AAGGTGGATG AGCGCGGCTA CGTGAGCATC GTGGGCCGCA GCAAGGACCT GATCATCAGC
GGTGGCTACA ACGTCTACCC GGCCGAGATC GAGGGCTACA TCAACGAGAT GCCCGGCGTG
GCCGAGAGCG CCGTGGTCGG CGTGCCGCAC CCGGACTTCG GCGAAGTGGG TGTGGTGGTG
GTCATCCCCA AGCCCGGTGC AAAGGTAGAT GGCGACGCGG TCATCGCATC GCTCAAGAGC
CAACTGGCCA ACTTCAAGAT TCCCAAACGC TGCTTCGTCA CCACCGAATT GCCGCGCAAC
ACCATGGGCA AGGTGCAAAA GAACCTGCTG CGCGACCAGT ACAAGGGGCT GTTCGCCTGA
 
Protein sequence
MSSSSQNLFS ALRAAFPADL DQTAVEAASA AGAPLLYTWR DLDRASARIA NLLASLKLPE 
GSRIAVQVEK SVEAMLLYLA TLRAGYVFLP LNTAYQSAEI EYFIGNAEPA VVVCTPGNFG
WVSKIAFTAG TQHVFTLGDD RTGSLLERAA HFGDEHRAVP RKADDLAAIL YTSGTTGRSK
GAMLTHGNLL SNAQVLKDYW GWKPGDVLIH ALPIFHVHGL FVAIHGALIN GSKMIWMAKF
DPKAVIAAMP RATVFMGVPT LYVRMLAEPA LTQAAASHMR LFIAGSAPLL IETFKEWQDR
TGHTILERYG MSETIMLTSN PYAADARHGG QDERRGSTVG FPLPGVGLRV VDDAGKPVPV
GEIGNIQVKG PNVFKGYWRM PEKTREEFSA DSWFKTGDVG KVDERGYVSI VGRSKDLIIS
GGYNVYPAEI EGYINEMPGV AESAVVGVPH PDFGEVGVVV VIPKPGAKVD GDAVIASLKS
QLANFKIPKR CFVTTELPRN TMGKVQKNLL RDQYKGLFA