Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1080 |
Symbol | |
ID | 4671177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1135067 |
End bp | 1136626 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838199 |
Product | malonyl-CoA synthase |
Protein accession | YP_985391 |
Protein GI | 121593495 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.261639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCT CCTCCCAGAA CCTGTTTTCC GCGCTGCGCG CCGCCTTTCC TGCTGACCTG GACCAGACCG CCGTCGAGGC CGCCTCGGCC GCGGGTGCGC CGCTGCTCTA CACCTGGCGC GACCTGGACC GCGCCAGCGC CCGCATCGCC AACCTGCTGG CATCGCTGAA GCTGCCCGAG GGCAGCCGCA TCGCCGTGCA GGTGGAAAAG TCGGTCGAAG CCATGCTGCT GTACCTGGCC ACGCTGCGCG CCGGCTACGT GTTCCTGCCG CTGAACACCG CCTACCAGAG CGCAGAGATC GAGTACTTCA TCGGCAATGC CGAGCCGGCC GTGGTGGTCT GCACGCCAGG CAACTTCGGC TGGGTGTCGA AGATCGCCTT TACTGCCGGC ACGCAACATG TGTTCACGCT GGGCGACGAC CGCACCGGCA GCCTGCTGGA GCGCGCCGCG CACTTCGGCG ACGAGCACCG CGCCGTCCCG CGCAAGGCTG ACGACCTGGC TGCCATCCTC TACACCAGCG GCACCACGGG ACGCAGCAAG GGCGCGATGC TCACGCATGG CAACCTGCTG TCCAATGCCC AGGTGCTCAA GGACTACTGG GGCTGGAAGC CCGGCGACGT GCTGATCCAC GCGCTGCCCA TCTTCCACGT GCACGGCCTG TTCGTGGCCA TCCATGGTGC GCTGATCAAT GGCAGCAAGA TGATCTGGAT GGCGAAGTTC GACCCCAAGG CGGTGATCGC CGCCATGCCG CGCGCCACGG TGTTCATGGG CGTGCCCACG CTCTACGTGC GCATGCTGGC CGAGCCGGCG CTGACCCAGG CCGCGGCCAG CCACATGCGG CTGTTCATCG CGGGCTCGGC GCCGCTGCTC ATCGAGACTT TCAAAGAATG GCAGGACCGC ACGGGCCACA CCATCCTGGA GCGCTACGGC ATGAGTGAGA CCATCATGCT CACCAGCAAT CCCTACGCGG CCGACGCGCG CCATGGCGGG CAGGACGAGC GCCGCGGCTC CACCGTGGGC TTTCCGTTGC CCGGCGTGGG CCTGCGCGTG GTGGACGATG CCGGCAAGCC GGTGCCCGTG GGCGAGATCG GCAACATCCA GGTCAAGGGC CCCAACGTGT TCAAGGGCTA CTGGCGCATG CCCGAGAAGA CCAGGGAAGA GTTCAGCGCC GACAGCTGGT TCAAGACCGG CGACGTCGGC AAGGTGGATG AGCGCGGCTA CGTGAGCATC GTGGGCCGCA GCAAGGACCT GATCATCAGC GGTGGCTACA ACGTCTACCC GGCCGAGATC GAGGGCTACA TCAACGAGAT GCCCGGCGTG GCCGAGAGCG CCGTGGTCGG CGTGCCGCAC CCGGACTTCG GCGAAGTGGG TGTGGTGGTG GTCATCCCCA AGCCCGGTGC AAAGGTAGAT GGCGACGCGG TCATCGCATC GCTCAAGAGC CAACTGGCCA ACTTCAAGAT TCCCAAACGC TGCTTCGTCA CCACCGAATT GCCGCGCAAC ACCATGGGCA AGGTGCAAAA GAACCTGCTG CGCGACCAGT ACAAGGGGCT GTTCGCCTGA
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Protein sequence | MSSSSQNLFS ALRAAFPADL DQTAVEAASA AGAPLLYTWR DLDRASARIA NLLASLKLPE GSRIAVQVEK SVEAMLLYLA TLRAGYVFLP LNTAYQSAEI EYFIGNAEPA VVVCTPGNFG WVSKIAFTAG TQHVFTLGDD RTGSLLERAA HFGDEHRAVP RKADDLAAIL YTSGTTGRSK GAMLTHGNLL SNAQVLKDYW GWKPGDVLIH ALPIFHVHGL FVAIHGALIN GSKMIWMAKF DPKAVIAAMP RATVFMGVPT LYVRMLAEPA LTQAAASHMR LFIAGSAPLL IETFKEWQDR TGHTILERYG MSETIMLTSN PYAADARHGG QDERRGSTVG FPLPGVGLRV VDDAGKPVPV GEIGNIQVKG PNVFKGYWRM PEKTREEFSA DSWFKTGDVG KVDERGYVSI VGRSKDLIIS GGYNVYPAEI EGYINEMPGV AESAVVGVPH PDFGEVGVVV VIPKPGAKVD GDAVIASLKS QLANFKIPKR CFVTTELPRN TMGKVQKNLL RDQYKGLFA
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