| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1078 |
|---|
| Symbol | |
|---|
| ID | 4671113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1133116 |
|---|
| End bp | 1134150 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639838197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985389 |
|---|
| Protein GI | 121593493 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.058258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGAGA GAGAGAACTT GAGCCAGATC GCCACCGCCG CGCTGCAACG CCGTGACATG
CTGCGCGCAG CCGGCGCAGC CGGCGCTGCG GGCCTGGCGC TGGCCACGGG CGGTGCCTGG
GCGCAAGGCG CCAGCGGCTG GCCGACCAAA CCGGTCAACA TGGTGGTGCC GTTCCCCGCG
GGCGGCGGCA CGGATGCCTT TGCGCGCCCA TTGGCTGCGC AGTTCGCCAA ATCCACGGGC
AAGACGCTGG TGATCGACAA CCGCGGCGGC GCGGGCGGCA CCGTGGGTGC CAGCGTAGCG
GCCAAGGCGC CAGCCGATGG CTACAACCTG TTCATGGGTG GCGTGCACCA TGTGATTGCA
CCGTCCATGT ACCCCAAGCT GGACTACGAC CTGGAAAAGG ACTTCGTGCC GCTGGCCCTG
GTGGCCAACG TGCCGCAGGT GCTGGTGGTG AACCCGCGCA ACGTGACGGC CACCAACATG
AAGCAATTCA TGGACTTCGT GAAGGCCAAC CCCGCCAAGC TGAACTATGC GTCGGCCGGC
TCGGGCACCT CGCACCACCT GGCGGGCGAG CTGTTCAAGC TGCAGACGGG GACTTTCATC
ACCCACATCC CCTATCGCGG CGCGGGACCT GCGCTGCAGG ACCTGATCGG CGGCAACGTG
GACATGCTGT TCGACGGCCT GGGCTCGTCG GCCTCGCACA TCAAGGGCGG GCGCATCAAG
GCGCTGATGG TGTCGGGCTC CAAGCGCAAC CCGGCCTTCC CCGACGTGCC CTGCGCGGCA
GAGGTGGGCC TGCCGGACTA CACCGTGTCC ACCTGGTATG GCCTGTGGGC GCCCAAGGGC
ACGCCGGCCG ACCTGCAGGC GCGCATCGTC GAGGAGATCC GCAAGCTCGG CCAGGCCGAG
GAGCTCAAGG CCATCTGGGC CGGCAACGGC GCGGAGTTCG GCACGCTGTC GCAGGCGGAC
TTCGCCAAGA TGGTCAGCAG CGAGATCAAG CGCTGGGCGC AGGTGGTGAA GGCCTCGGGC
GCCAAGCTGG AGTGA
|
|---|
| Protein sequence | MRERENLSQI ATAALQRRDM LRAAGAAGAA GLALATGGAW AQGASGWPTK PVNMVVPFPA
GGGTDAFARP LAAQFAKSTG KTLVIDNRGG AGGTVGASVA AKAPADGYNL FMGGVHHVIA
PSMYPKLDYD LEKDFVPLAL VANVPQVLVV NPRNVTATNM KQFMDFVKAN PAKLNYASAG
SGTSHHLAGE LFKLQTGTFI THIPYRGAGP ALQDLIGGNV DMLFDGLGSS ASHIKGGRIK
ALMVSGSKRN PAFPDVPCAA EVGLPDYTVS TWYGLWAPKG TPADLQARIV EEIRKLGQAE
ELKAIWAGNG AEFGTLSQAD FAKMVSSEIK RWAQVVKASG AKLE
|
|---|
| |