| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1057 |
|---|
| Symbol | fumC |
|---|
| ID | 4670733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1109347 |
|---|
| End bp | 1110738 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639838176 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_985368 |
|---|
| Protein GI | 121593472 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCA GCACCCGTAT CGAACGCGAC ACCTTCGGCC CCATCGAGGT GCCGGCCGAC
AGGCTCTGGG GCGCGCAGAC GCAGCGCTCG CTGCAGAACT TCGCCATCTC GGGTGAACGA
CAGCCGCAGG AACTCATCCG CGCGCTGGCG CAGGTCAAGC GCGCGTCGGC CCGGGTCAAC
CACGCGCTGG GGCTGCTGGG GGCGGACAAG ACGCGCGCCA TCGTCGCCGC GGCCGACGAG
GTGCTGCTGG GCCAGCACGA CGACGAGTTC CCGCTGGTGG TCTGGCAGAC CGGCTCGGGC
ACGCAGACCA ACATGAACGT CAACGAGGTG CTGGCCAACC GCGCCAGCGA GCTGTTGGGC
GGCGAGCGCG GCGAGGCACG GCTGGTACAT CCCAACGACG ACGTGAACAA GAGCCAGTCC
AGCAACGACG TGTTCCCCAC CGCCACGCAT GTGGCCGCGG TGCAGGCGCT GGTGCACCGG
CTGCTGCCCG CCATGGAGGA GCTGCGCGCC ACCCTGCAGG CCAAGGCCGA GGCGTTCGAC
GACATCGTGA AGATCGGCCG CACCCATCTG CAGGATGCGA CGCCGCTCAC GCTGGGGCAG
GAGATCTCGG GCTGGGTGGC GCAGCTTGCC CATGGGGAAC GCCACGTGCG CGCGGCGCTG
CCGCACCTGT ATGAACTGGC CCTGGGCGGG ACGGCCGTGG GCACGGGCCT GAATGCGCCC
GAGGGCTACG CCGAACGTGT GGCGCAGGAG CTGGCCCAGT TCACCGGTCA GCCCTTCGTG
ACCTCGCCCA ACAAGTTCGA ATCGCTCGCA TCGCAGGACG CGCTGGTGCA TGCCCACGGC
GCGCTGAAGA CGCTGGCGGC CAGCCTCACG AAGATCGCCA ACGACGTGCG GTGGCTGGCC
AGCGGCCCGC GCTGCGGCAT CGGCGAGATC ACCATCCCTG AGAACGAGCC CGGCTCGTCC
ATCATGCCCG GCAAAGTGAA CCCCACGCAG TGCGAGGCGC TGACCATGCT GTGCGCCCAG
GTGCTGGGCA ACGACGTGGC CATCAACATC GGCGGGGCCA GTGGCAACTT CGAGCTGAAC
GTGTTCCGCC CGCTGGTGGC GCACAACTTC CTGCAGAGCG TGCGGTTGCT GGCCGACGGC
ATGGTGAGCT TCAACGAGCA CTGCGCCGTG GGTATCGAGC CCAACCGCGC GCGCATCGCG
GAGCTGGTGG AGCGCTCGCT GATGCTGGTG ACGGCGCTCA CCCCGCACAT CGGCTACGAC
AAGGCCGCGG CGATTGCCAA GAAGGCGCAC AAGGAAGGCA GCACGCTGCG CGAGGCCGCG
CTGGCGCTGG GCTACGTGAC GCCCGCGCAG TTCGATGAGT GGGTGGTGCC CGCCCGGATG
GTGGGGCGCT AG
|
|---|
| Protein sequence | MTSSTRIERD TFGPIEVPAD RLWGAQTQRS LQNFAISGER QPQELIRALA QVKRASARVN
HALGLLGADK TRAIVAAADE VLLGQHDDEF PLVVWQTGSG TQTNMNVNEV LANRASELLG
GERGEARLVH PNDDVNKSQS SNDVFPTATH VAAVQALVHR LLPAMEELRA TLQAKAEAFD
DIVKIGRTHL QDATPLTLGQ EISGWVAQLA HGERHVRAAL PHLYELALGG TAVGTGLNAP
EGYAERVAQE LAQFTGQPFV TSPNKFESLA SQDALVHAHG ALKTLAASLT KIANDVRWLA
SGPRCGIGEI TIPENEPGSS IMPGKVNPTQ CEALTMLCAQ VLGNDVAINI GGASGNFELN
VFRPLVAHNF LQSVRLLADG MVSFNEHCAV GIEPNRARIA ELVERSLMLV TALTPHIGYD
KAAAIAKKAH KEGSTLREAA LALGYVTPAQ FDEWVVPARM VGR
|
|---|
| |