Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1054 |
Symbol | |
ID | 4670702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1105413 |
End bp | 1106333 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639838173 |
Product | hypothetical protein |
Protein accession | YP_985365 |
Protein GI | 121593469 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.378299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGT CGCTGTCGCG GGCCGACTGG GCCAAGGCGC TGGTGGTGGT TGTGGTCTGG GGGCTGAACT TCGTCGTCAT GAAGTGGGGC CTGGCCACGC TGTCGCCGCT GGTGCTGTGC GCGCTGCGCT TCCTGGCGGC GTCGCTGCCG TTCCTGCTGT TCGTGCGCCC GCCGCGGCAC CTGTCCTGGG GCGTGATGGC GGCCTATGGC TTGGTGCAGG GTGTGGGACA GTTCGGCCTG CTGTTCACCG GCATGCAGCT GGGCATGCCG GCGGGCATGT CCTCGGTGGT GCTGCAGACG CAGGCATTCA TCACCATGCT CATGGCGGCA GCCTTGTTGG GCGAGACGCC GCACCGCTGG CAGTGGCTGG GCCTGTGCAT CGCCATCGGC GGGCTGGTGT TCATCGGCGC GGCGCACGGC GACGGCGCCT CCGGCATGAC CCTGGCGGGC TTCCTGCTCA CCGTGGGGGC CGCGGCCATG TGGGCCGGCT CCAACCTGCT CACGCGCGTG GCAGCGCGCC AGGGGCCGTA CGAGCCCGTG TCCTTCATCG TCTGGAGCAG CGTGTTCCCC ATCGTGCCGC TGTTGCTGTT GGCCTGCGTG GTGGACGGCA CGGAGGCCGT GGTGCAGCAG CTGCGCGGCC TGGGCGGGCG CGAGTTGGGC GTGGTGGCCT ATCTGGCGCT GTTGTCCACC CTGCTGGGCT ATGGCCTGTG GACCCGCCTG CTGCAGCGCT ACGCCGCCAG CACCGTGGCG CCGCTGTCGC TGCTGGTGCC GGTGGTGGGA CTGCTGTCGG CCATGCTGCT GCTGGGCGAG CGCCCCACGG CCTGGCAATG GATGGGCACG CTGGGCGTGC TGGCGGGCAT GGTGATCAAC CAGTTCGGCG GGCTGTGGGC CAAGCGCCGC CGCGGGGTTG CATCTATATA A
|
Protein sequence | MSTSLSRADW AKALVVVVVW GLNFVVMKWG LATLSPLVLC ALRFLAASLP FLLFVRPPRH LSWGVMAAYG LVQGVGQFGL LFTGMQLGMP AGMSSVVLQT QAFITMLMAA ALLGETPHRW QWLGLCIAIG GLVFIGAAHG DGASGMTLAG FLLTVGAAAM WAGSNLLTRV AARQGPYEPV SFIVWSSVFP IVPLLLLACV VDGTEAVVQQ LRGLGGRELG VVAYLALLST LLGYGLWTRL LQRYAASTVA PLSLLVPVVG LLSAMLLLGE RPTAWQWMGT LGVLAGMVIN QFGGLWAKRR RGVASI
|
| |