Gene Ajs_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1054 
Symbol 
ID4670702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1105413 
End bp1106333 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID639838173 
Producthypothetical protein 
Protein accessionYP_985365 
Protein GI121593469 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.378299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CGCTGTCGCG GGCCGACTGG GCCAAGGCGC TGGTGGTGGT TGTGGTCTGG 
GGGCTGAACT TCGTCGTCAT GAAGTGGGGC CTGGCCACGC TGTCGCCGCT GGTGCTGTGC
GCGCTGCGCT TCCTGGCGGC GTCGCTGCCG TTCCTGCTGT TCGTGCGCCC GCCGCGGCAC
CTGTCCTGGG GCGTGATGGC GGCCTATGGC TTGGTGCAGG GTGTGGGACA GTTCGGCCTG
CTGTTCACCG GCATGCAGCT GGGCATGCCG GCGGGCATGT CCTCGGTGGT GCTGCAGACG
CAGGCATTCA TCACCATGCT CATGGCGGCA GCCTTGTTGG GCGAGACGCC GCACCGCTGG
CAGTGGCTGG GCCTGTGCAT CGCCATCGGC GGGCTGGTGT TCATCGGCGC GGCGCACGGC
GACGGCGCCT CCGGCATGAC CCTGGCGGGC TTCCTGCTCA CCGTGGGGGC CGCGGCCATG
TGGGCCGGCT CCAACCTGCT CACGCGCGTG GCAGCGCGCC AGGGGCCGTA CGAGCCCGTG
TCCTTCATCG TCTGGAGCAG CGTGTTCCCC ATCGTGCCGC TGTTGCTGTT GGCCTGCGTG
GTGGACGGCA CGGAGGCCGT GGTGCAGCAG CTGCGCGGCC TGGGCGGGCG CGAGTTGGGC
GTGGTGGCCT ATCTGGCGCT GTTGTCCACC CTGCTGGGCT ATGGCCTGTG GACCCGCCTG
CTGCAGCGCT ACGCCGCCAG CACCGTGGCG CCGCTGTCGC TGCTGGTGCC GGTGGTGGGA
CTGCTGTCGG CCATGCTGCT GCTGGGCGAG CGCCCCACGG CCTGGCAATG GATGGGCACG
CTGGGCGTGC TGGCGGGCAT GGTGATCAAC CAGTTCGGCG GGCTGTGGGC CAAGCGCCGC
CGCGGGGTTG CATCTATATA A
 
Protein sequence
MSTSLSRADW AKALVVVVVW GLNFVVMKWG LATLSPLVLC ALRFLAASLP FLLFVRPPRH 
LSWGVMAAYG LVQGVGQFGL LFTGMQLGMP AGMSSVVLQT QAFITMLMAA ALLGETPHRW
QWLGLCIAIG GLVFIGAAHG DGASGMTLAG FLLTVGAAAM WAGSNLLTRV AARQGPYEPV
SFIVWSSVFP IVPLLLLACV VDGTEAVVQQ LRGLGGRELG VVAYLALLST LLGYGLWTRL
LQRYAASTVA PLSLLVPVVG LLSAMLLLGE RPTAWQWMGT LGVLAGMVIN QFGGLWAKRR
RGVASI