| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1041 |
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| Symbol | |
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| ID | 4674069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1087039 |
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| End bp | 1087665 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639838161 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_985353 |
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| Protein GI | 121593457 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0743648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTT TACTTTCACT GTCGCGGGCC ATCGACAGGC TCAACGCGTT CGTGGGCAAG
TATTCAATCT GGCTCATCTT CGCATCCACT TTCATCAGTG CCGCCAACGC CATCGTGCGC
AAGGCGTTGG ACACGAGTTC CAACGCCTTT CTGGAAGTGC AGTGGTACCT GTTCGCATGG
TCTTTCCTGA TCGCCGCCGG CTGGACGCTG CTCAACCGCG AGCACGTGCG CATCGACGTG
GTCAACAGCC GCTTGCCCAA GAAGGTGCAG GTGTGGATCG ACATCGTCGG CTTTGCGCTC
TTTCTCACCC CGCTGTGCAT CACCATCCTG TACCTGAGCA TGCCGGTCGT GATCCAGATG
TACCAGTCGG GTGAAGTGTC CGGCAATCCT GGCGGCCTGA TCCGCTGGCC CGTATGGGTG
GCGATTCCCG TCGGTATCAC GCTGCTGATG CTGCAGGGCT GGTCCGAACT CATCAAGCGC
ATCGCTTTCC TGCGTGGCCA GGGGCCCGAT CCCATGGGCA AGCTCAGCGA CAAGAGCGCT
GAAGAAGAAC TGGCCGAGGC GCTGCGCGCC GAAGCTGAGA GAAAGCAGGA GCAGGCCCTG
TCCGCCGCTC CCGCCGCGCA ACGCTGA
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| Protein sequence | MQALLSLSRA IDRLNAFVGK YSIWLIFAST FISAANAIVR KALDTSSNAF LEVQWYLFAW
SFLIAAGWTL LNREHVRIDV VNSRLPKKVQ VWIDIVGFAL FLTPLCITIL YLSMPVVIQM
YQSGEVSGNP GGLIRWPVWV AIPVGITLLM LQGWSELIKR IAFLRGQGPD PMGKLSDKSA
EEELAEALRA EAERKQEQAL SAAPAAQR
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