Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1028 |
Symbol | |
ID | 4671628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1071268 |
End bp | 1073424 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639838148 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_985340 |
Protein GI | 121593444 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.289591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.407367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTC CCCTTGTTCC CCGCCCGCGG CGCACGGCCG TGGCCCAGGC CGCGCAGGCC GCGCAGGCCG CGCTATGGCT GCTGTGCGGC AGCGCGATCG CACAGACCGC CGAGGCCCCG CCGGGCGCGC CGGCGGCAAG CGCCACCCCC ACCCTGCGCC AGGTAGACGT GGTCGACTCC ACGGCGGGCG CCGCCGCCAC GCCCGCGCGC CGCGCGCAAA GCAGCTCGCG CCTGGGCCTG CCAGTGCTGG AGACGCCGCG CGCCGTGAGC GTGATCGACA GCGCGCTGCT GGAGCAGCAG TTGGCCACCA CGGAGCGCGA CGTGCTGCGC AACGCGGCCG GCGTGTCCTC GCGCAGCGAA TACGCAGGCT CGTACTCGCA GTTCGCGATC CGCGGGTTGT GGGCCAACAA CACCTACAAC TACCTGCGTG ACGGTGCCAA GTTCGTGCAC CTGCTCGATC CACCACTGTT CAACATCGAA CGCGTCGAGG TCATCAAGGG CCCGGCCGCG CTGGAGTTCG GCCAGGTGGC GCCGGGCGGC CTCGTCAACT ACGTGAGCAA GCGGCCCCAG GCCGATCCGC TGCGCAGCGT GAAGATCGGT GCGGGCAGCC ACGGCTGGCG CAATGCCGAA TTCGACCTCA CCGGCCCCCT GAATGCCGAC GGCACGCTGC GCTACCGGCT GGACGGCGGC GCGAGCCGCG GCGGCAGCTT CGTGGACGGC AACACGCCGC GCAAGCAGGG CCTGGCCGGC AGCCTGGAAT GGCAGCTCAC GCCGGACACG CGCTGGCGCG CACAGGCCGA GTACCAAAGC CTGGAAGGCG TATCCACCGT GGGGCTGGCG GTGCCCGACC CGCAGAACCC GCGCAGCGCG GACGTGCTCC CGGTGGGCAC CTTCTATGGC GAGCCCTGGC TGCGCACCGA CGGGCACCTG CGCTTTTATT CCACGGAGCT GCAGCACCGC TTCACCGATA GCCTTGAAGG GCGGGTGCAC CTGTCGCGCA ACGAGACCTT TCGCAACGTG AACATGGTCT ACCCCATCGG CCCGGTGACG GGCGGCCAGG TGGCGCGCAG CTACTGGCTG GCACCGGGGC AGAACTACAC GTCGGACACC GCGCTGGCCG AACTGCGCGC ACAAGCGCGG ACGGGTCCCG TGCGCCATAC GCTGCTCGCC GGGCTGGATT GGCGTGCCAT CGAGGGCGTG TACGGTGCGC GTGGCACGGG CAACCTGGGT GCAGTGGACC TGTACCAGCC CGTGACGGGC CTGGTGCCGC CCGCGGCTTC GGGCGGCAGG GCCGCCGTGG CCTCGGACAC GCGCAACACG GGCCTGTTCG TGCAGGACCG GATCGCCCTG GGTAACTTCA GCCTGCTGCT GGGCCTGCGC CACGACCGGC TCAAGGACGC TTACACCAAG CCCGCCACGG ATCTGAGCAA GACCCAGCCC AGCGCCGCGC TGAGCTGGCA GCCCCTGCCC GCCAGCATGT TCTATGTGAG CCATGCGCGC TCGTTCCAGG CGAACTCGGG CACGCTGCTG TGGGGCGACC GCGCGGCACC GCCCTCCGAG GGCAAGCAGC TGGAGGTGGG CTGGAAGCAG GAATGGCTGG GCCAGCGCCT GCTCACCACC GTATCGGCCT TCGCGCTGGA ACTGACCAAC GCACCGGCCA ACGACCCCGA GCACCCCGGC TACTCGGTGC TGACAGGCCG CCAGCGCATC AAGGGGCTGG AAGTGGAGGC CCAAGGCCGC ATCACCCCGG GCTGGAGCGT CACCGCGCAG GCCACCTTCC TCGACCCCAA GGTGCTGGCA GACACCGTGC CCGGCGCCAA CGTGGGCCAC CGCGTCGCGC TCGCCCCGCG GCGCACCGCC TCGCTGTGGA CCCAGTACCG CCTGCCCGGG GTGCCCGGCC TGTGGGTCGG CGGCGGGCTG GTCCACCAGG GCGACAAGTT CACCGCCAAC GACAACCGGT GGCGCCTGCC CGGCTACACC GTGGTGGACC TCGCGCTGGG CTACCAGTTC GGCGGCGGCG TGCGACTGCA AGCCAACCTG AAGAACGCCG CCAACCGGCG CTACTACGTG GACGCATCCA CCACGGCCGC GGGCTTTGCG GCCGTCACAC CGGGCGAGCC GCGCTCGCTC TACGTCACGC TGGACTACAC GTTCTGA
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Protein sequence | MKPPLVPRPR RTAVAQAAQA AQAALWLLCG SAIAQTAEAP PGAPAASATP TLRQVDVVDS TAGAAATPAR RAQSSSRLGL PVLETPRAVS VIDSALLEQQ LATTERDVLR NAAGVSSRSE YAGSYSQFAI RGLWANNTYN YLRDGAKFVH LLDPPLFNIE RVEVIKGPAA LEFGQVAPGG LVNYVSKRPQ ADPLRSVKIG AGSHGWRNAE FDLTGPLNAD GTLRYRLDGG ASRGGSFVDG NTPRKQGLAG SLEWQLTPDT RWRAQAEYQS LEGVSTVGLA VPDPQNPRSA DVLPVGTFYG EPWLRTDGHL RFYSTELQHR FTDSLEGRVH LSRNETFRNV NMVYPIGPVT GGQVARSYWL APGQNYTSDT ALAELRAQAR TGPVRHTLLA GLDWRAIEGV YGARGTGNLG AVDLYQPVTG LVPPAASGGR AAVASDTRNT GLFVQDRIAL GNFSLLLGLR HDRLKDAYTK PATDLSKTQP SAALSWQPLP ASMFYVSHAR SFQANSGTLL WGDRAAPPSE GKQLEVGWKQ EWLGQRLLTT VSAFALELTN APANDPEHPG YSVLTGRQRI KGLEVEAQGR ITPGWSVTAQ ATFLDPKVLA DTVPGANVGH RVALAPRRTA SLWTQYRLPG VPGLWVGGGL VHQGDKFTAN DNRWRLPGYT VVDLALGYQF GGGVRLQANL KNAANRRYYV DASTTAAGFA AVTPGEPRSL YVTLDYTF
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