Gene Ajs_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0991 
Symbol 
ID4674576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1031969 
End bp1033240 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content66% 
IMG OID639838114 
Productdiguanylate phosphodiesterase 
Protein accessionYP_985306 
Protein GI121593410 
COG category[T] Signal transduction mechanisms 
COG ID[COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CCACACCTCC CGCTTCTCCC TCGGCGGCCG GCGCCTCCCA GGCTGGCAGC 
ACCGGCTCCA TGATCGCCCG GCAGGCCATC ATGAACGGCC AGCAGGCGGT CGTCGGCTAC
GAACTCTTCA ACCGCTCGCG CTCCACCGTC GGCCACACGG CCGCCAGCGA CGTGATCCTG
GTCTTCACCG CGCTGTCGCA TGCGGGCACC GAAGAGCTGG TGGGCAAGAT GCTGATTTTC
GTGAACTGCA CCCACGAAAG CCTGACGGGC GGGCACCTGG AACTGGTGAG CCCCGACAAG
GTGGTGCTGG AGATCCCTCC GCTGGGCCAC GTGGCCGCGG CCGAGGTGCA TGCGCGGCTT
CCCATCCTGC AGGCGCTGCG CAGCCGCGGC TTTCACCTCG CCTTCAACCA CACGGTGCTG
GAGTCCACCT ACGCGCCCTG GCTGCCGCTG GCCGACTACA TCAAACTCGA CATGTCGGTG
CTTGCGCGCG ACCAGCTCGC GGTGCTGATC AACTACGCGG GGCGCCATTC CCAGGCCGAA
CTGATCGCGG AAAAGCTCGA AACCGCGCAA CAGTACGACA TGGTGTCGTC CATGGGCGTG
GAAATGTTCC AGGGCTACTG GTTCTCGCGT CCCACGCTGG TGGAGGCCAA ACTGCTCACT
CCCGGCCAGG CGAGCATCGT GCAGCTGCTC AACCTGGTGC GCAGCCAGGC CAGCACCGAC
GAGATCGAAG AGGTCCTCAA AAAGGATGCT GGGCTGGCCT TCAACCTGAT GCGCCTGATC
AACTCCGCGG GGCTGGGCAT GACGCGCGAG ATCACCTCCT TTCGCCAGGC GGTGCTGCTG
CTGGGACTCA AGAAGCTGTT CCGCTGGGCC GCCCTGCTGC TCACGGCGGT GCGCAGCGGC
GGTACGCCCC CGGCCGTGGG GCAGACGGCC GTGGTGCGCG GCCGCCTCAT GGAACTGCTG
GCCCAGGAAT TTCTGCCCGC CGAAGAAGCC GACCAGGCGT TCGTGATCGG CATCTTCTCC
ATGCTGGACC AGATGCTCGG CATGCCGCTG GCCTCCGCCG TGGGGCTGCT CAACCTGCCC
GAAGAGCTGT CCACTGCCCT GCTACAACGC AGCAACGTGT ACGGCCAGCT GCTGACACTG
GCCGAAGCCT GCGAGACCAG CGACGACCAC ACCTTCGACC AGATCGCCCA ATCGCTCCAC
CTGACGAACC AGCAGATCAA CTGGGCCCAC TTGCAAGCCC TGGCCTGGGC GGACCAGATG
GCGCCCGCCT GA
 
Protein sequence
MTNSTPPASP SAAGASQAGS TGSMIARQAI MNGQQAVVGY ELFNRSRSTV GHTAASDVIL 
VFTALSHAGT EELVGKMLIF VNCTHESLTG GHLELVSPDK VVLEIPPLGH VAAAEVHARL
PILQALRSRG FHLAFNHTVL ESTYAPWLPL ADYIKLDMSV LARDQLAVLI NYAGRHSQAE
LIAEKLETAQ QYDMVSSMGV EMFQGYWFSR PTLVEAKLLT PGQASIVQLL NLVRSQASTD
EIEEVLKKDA GLAFNLMRLI NSAGLGMTRE ITSFRQAVLL LGLKKLFRWA ALLLTAVRSG
GTPPAVGQTA VVRGRLMELL AQEFLPAEEA DQAFVIGIFS MLDQMLGMPL ASAVGLLNLP
EELSTALLQR SNVYGQLLTL AEACETSDDH TFDQIAQSLH LTNQQINWAH LQALAWADQM
APA