Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0990 |
Symbol | |
ID | 4674635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1030623 |
End bp | 1031918 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639838113 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_985305 |
Protein GI | 121593409 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCC TTCCAGACAC CGCCGCACAG CTCCCCGCCG ATTCCGCCCA GCCGTCACCC GAGGCCACCG AGGCGCAGAA CCAGGTCGTC ATCGCACGAC AGGCCATCCT GGACGAACAG CGCACCGTCT TTGGCTACGA ACTGTTCGAC CGGTCCACCG CCGCGGACGC GCACACCGCC GCCAGCGATG CGGCGCTGCT GTTCAACGCG CTGTCGTATG CGGGCTCCGA GGCGCTGGTG GGCAAGAAAA CCGTCTTCAT CAATTGCACG CACGACAGCC TGGCCGGCGG ACACCTGGAG CTGATCCACC CCGAGAAAGT GGTGCTGGAA GTACCCACAC TCGGCGCCCA GGCCACGGCC GAGCAGATCG AGCAGTACAT CCCCACGCTG CAAGCGGTGC GCACGCGCGG CTTTCGGCTG GCCTTCAACC AGGACGTGCT GCGGCGCGCC TACAGCAGCT GGGTGCCTCT GGCCTCGTTC ATCAAGCTGG ACATGCAGGC CTTCAAGCCG GAGCTCGCCG AGCCGCTCGT GAAGTTCGCC CAAGCCCACT CGCAGGCCAC CCTGGTGGCC GAGAAGGTAG AAACGGCCGA ACAGTACCAG CGCATGGCTT CGCTGGGCGT GAAGCTGTTC CAGGGCTACT GGTTCGCACA GCCCTCGCTG GTCAAGGCGC AAACCATCCG TCCCTCGCAG GCGACCATCA TCCAGCTCAT CAACCTGGTG CGCCAGCAGG CCAGCACCGG AGAAATCGAG GAGCTGCTCA AGAAGGACCC CACGCTGTCC TTCAACCTGC TGCGTTTCAT CAATTCCTCG GGCTTCGGCC TGTCGTGCGA GGTGACCTCG TTCCGTCACG CGGTGATGAT CCTGGGCCTG AAGAAGCTGT TCCGCTGGGC GGCGCTGTTG ATGACTACCT CGCGCGCCAG CGGCTCGCCG CCCGCCGTGG GCCAGACGGC CGTGGTGCGC GGCCGCCTCA TGGAACTGCT GGCCGCCGAG CTGCTGCCCC CCGAGGAATG CGACAACGCC TTCGTGGTGG GGGTCTTCTC GCTGCTGGAT GCGATGCTGG GCGTGCCGCT GGAGCGCGCC CTGGAAACGG TGGCCCTGCC CCAGCCGGTG CTTGACGCAC TGCTGCACAA CAAGGGCGTG TTCGCCCCCT TCCTGGAGCT CACCAAGGCC TGCGAAAGCG GTGACGACGA GGCTTTCGCG CGCACGGCCG AGGCGCTGCA CCTATCCAAC CGCCAGGTCA ACTGGGCCCA CCTGCAGGCA CTGGCCTGGG CCGAGAGCCT GACGGCCGAC GAATAA
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Protein sequence | MSSLPDTAAQ LPADSAQPSP EATEAQNQVV IARQAILDEQ RTVFGYELFD RSTAADAHTA ASDAALLFNA LSYAGSEALV GKKTVFINCT HDSLAGGHLE LIHPEKVVLE VPTLGAQATA EQIEQYIPTL QAVRTRGFRL AFNQDVLRRA YSSWVPLASF IKLDMQAFKP ELAEPLVKFA QAHSQATLVA EKVETAEQYQ RMASLGVKLF QGYWFAQPSL VKAQTIRPSQ ATIIQLINLV RQQASTGEIE ELLKKDPTLS FNLLRFINSS GFGLSCEVTS FRHAVMILGL KKLFRWAALL MTTSRASGSP PAVGQTAVVR GRLMELLAAE LLPPEECDNA FVVGVFSLLD AMLGVPLERA LETVALPQPV LDALLHNKGV FAPFLELTKA CESGDDEAFA RTAEALHLSN RQVNWAHLQA LAWAESLTAD E
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