| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0960 |
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| Symbol | |
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| ID | 4673177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1000399 |
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| End bp | 1001652 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639838084 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_985276 |
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| Protein GI | 121593380 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000966275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAA TCAAGAACTA CTCCCTGAAC TTCGGACCGC AGCACCCGGC AGCACACGGC
GTGCTGCGCT TGGTGCTGGA ACTGGATGGC GAGGTCGTAC AACGTGCCGA CCCGCACATC
GGGCTGCTGC ACCGTGCCAC CGAAAAGCTG GCAGAGCACA AGACCTACAT CCAGTCCTTG
CCCTACATGG ACCGTCTCGA TTACGTGTCC ATGATGTGCA ACGAGCAGGC CTACTGCTTG
GCCATCGAGA AGATGCTGGG CATCGAGGTG CCGCTGCGCG CGAAGTACAT CCGAACGATG
TTCGGCGAAA TCACGCGCCT GCTGAACCAC CTGATGTGGC TGGGTTCGCA CGGCAACGAC
TGCGGCAGCT CCACGATCCT CATCTATACC TTCCGTGAGC GGGAGGACTT GTTCGACATG
TACGAGGCCG TTTCTGGCGC TCGCATGCAC GCGGCCTACT TCCGTCCGGG AGGCGTGTAC
CGGGACCTGC CGGACAGCAT GGCCCAGTAC AAGGTCAGCA AGATCAAGAA CGCCAAGGCT
ATCGAGGAGC TCAACCGTAA CCGCCAGGGT TCGCTGCTGG ATTTCATCGA CGATTTCACG
CAGCGCTTCC CCAAGTGCGT AGACGAGTAT GAGACCCTGC TGACAGACAA CCGGATCTGG
AAGCAGCGTA CGGTGGGTAT CGGCGTGGTG CCGGCTGAGC GCGCGTTGAA CCTGGGCATG
ACCGGCCCGA TGCTGCGCGG CTCGGGCATT GCATGGGACC TGCGCAAGAA GCAGCCGTAT
GACGCTTATG ACCGTGTGGA CTTCGATGTG CCGGTCGGGG TGACGGGCGA TAGCTATGAC
CGCTATCTCG TTCGCGTGCA AGAGATGCGC GAGTCCAATC GCATCATCAA GCAGTGCGTC
GATTGGCTCA GGGCCAACCC CGGCCCCGTC ATCACGGACA ACCACAAGAT CGCGCCGCCC
TCGCGCGAGG CCATGAAGTC CAACATGGAA GAGCTGATCC ACCATTTCAA GCTCTTCACG
GAAGGCTTCC GCGTGCCGGC CGGCGAGGCT TACGCGGCCG TTGAGCATCC CAAGGGGGAG
TTCGGTATCT ACATGGTGAG CGACGGTGCG AACAAGCCCT ACCGCCTGAA GATCCGCGCA
CCCGGGTTCG CGCATCTGGC CACACTCGAC GAAATGGCGC GGGGCCACAT GCTGGCCGAT
GCCGTGGCCA TCATCGGCAC CATGGATATC GTGTTCGGAG AGATTGACCG ATGA
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| Protein sequence | MAEIKNYSLN FGPQHPAAHG VLRLVLELDG EVVQRADPHI GLLHRATEKL AEHKTYIQSL
PYMDRLDYVS MMCNEQAYCL AIEKMLGIEV PLRAKYIRTM FGEITRLLNH LMWLGSHGND
CGSSTILIYT FREREDLFDM YEAVSGARMH AAYFRPGGVY RDLPDSMAQY KVSKIKNAKA
IEELNRNRQG SLLDFIDDFT QRFPKCVDEY ETLLTDNRIW KQRTVGIGVV PAERALNLGM
TGPMLRGSGI AWDLRKKQPY DAYDRVDFDV PVGVTGDSYD RYLVRVQEMR ESNRIIKQCV
DWLRANPGPV ITDNHKIAPP SREAMKSNME ELIHHFKLFT EGFRVPAGEA YAAVEHPKGE
FGIYMVSDGA NKPYRLKIRA PGFAHLATLD EMARGHMLAD AVAIIGTMDI VFGEIDR
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