| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0959 |
|---|
| Symbol | |
|---|
| ID | 4673101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 999764 |
|---|
| End bp | 1000372 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639838083 |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_985275 |
|---|
| Protein GI | 121593379 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000653552 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTA TTGCCATTCA CCCCGAGAGC CTGCGGGACG TGGTTGCCTC CGCTCTGGGT
GACCGCGTGC GCCAGATCTC GGTGGCGCTG GATGAGGTGA CCGTGGTGGT GTCCGCTGCG
CGCTATCTCG AAGCCATGCA AATCCTGCGC GATGCGCCCG ATTGCAAGTT CGAGCAATTG
ATTGATCTGT GCGGCGTCGA CTATTCTGCC TATGGCGCCA CGGGCTCGGA AGGACCGCGC
TACGCCGTGG TTTCCCATTT GCTCTCCGTT TCCCTCAACC AGCGGTTGCG CGTGAAGGTG
TTCTGCTCCG ACGACGACTT CCCCATCGTC GCCTCGGTTA CCGACATCTG GAACTCGGCC
AACTGGTTTG AGCGCGAGGC ATTCGATCTG TTCGGCATCG TGTTTGATGG GCACAACGAT
CTGCGCCGCA TCCTGACCGA TTACGGATTC ATCGGCCACC CGTTCCGCAA GGACTTCCCC
TTGTCCGGCC ATGTCGAGAT GCGCTATGAC GCCGACCAGC GTCGCGTGAT CTATGAGCCC
GTGACCATCG AGCCGCGCGA AGTGACGCCG CGCGTCATCC GCGAAGACAA GTACGGAGGC
CTGCACTGA
|
|---|
| Protein sequence | MTAIAIHPES LRDVVASALG DRVRQISVAL DEVTVVVSAA RYLEAMQILR DAPDCKFEQL
IDLCGVDYSA YGATGSEGPR YAVVSHLLSV SLNQRLRVKV FCSDDDFPIV ASVTDIWNSA
NWFEREAFDL FGIVFDGHND LRRILTDYGF IGHPFRKDFP LSGHVEMRYD ADQRRVIYEP
VTIEPREVTP RVIREDKYGG LH
|
|---|
| |