Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0918 |
Symbol | |
ID | 4671784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 967509 |
End bp | 968093 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838040 |
Product | isochorismatase hydrolase |
Protein accession | YP_985234 |
Protein GI | 121593338 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.509433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0420596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGCC CTGCCGCATT GCGCCGCACG CCGCTGCCGC GCAGCAAACA CGTGCTGCTG TTGGTGGATG TGATCAATCC GCTGAATTTC CCTACAGCGG CAGACCTGCT GCCGGGAGCG GTACGCGCCG CGAACGCCAT TGCGCGGCTG AAGGCACGCC TGGCGCGGCG CGGGGTCACG GCGATCTATG CCAACGACAA CTACGGCACG TGGCACAGCG ACTTCCGTGA CATTCTTACG GCCTGCCTCG CGCTGCCGGG GGCGCGCGGC GAGATGGCCT GCCAGCTTGC GCCCGCGCCG CAGGATCTGG TGATCCTCAA GCCACAGCAT TCGGCGTTCC ATTCGACTCC CTTGCAGCAT TTGCTGGACA AGATGCAGAC CGAGCAGCTG ATCATCGTGG GCCTGGCCGC CGACATGTGC GTGATGCTGA CGGCCACCGA TGCGCGCATG CTGGGCTACA AGGTGTGGGT GCCGTCGGAT TGCACCGCCG CGGAATCGGA ACACCGCAAG ACGGGGGCCC TGCGGCAATT GCATGAGGTG TTCAAGTGCG CCGTACGGCC TGCGGTACGG GCGGCTGCAC GCTGA
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Protein sequence | MARPAALRRT PLPRSKHVLL LVDVINPLNF PTAADLLPGA VRAANAIARL KARLARRGVT AIYANDNYGT WHSDFRDILT ACLALPGARG EMACQLAPAP QDLVILKPQH SAFHSTPLQH LLDKMQTEQL IIVGLAADMC VMLTATDARM LGYKVWVPSD CTAAESEHRK TGALRQLHEV FKCAVRPAVR AAAR
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