Gene Ajs_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0885 
Symbol 
ID4671268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp934301 
End bp934957 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID639838008 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_985203 
Protein GI121593307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.347055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCGA TCGAAACCCT TGTCGCGTTC TTTGGTGTTT CCGTGCTGCT GGCGCTCACG 
CCGGGGCCCG ACAACCTGTT CGTGCTGCTG CAGTCGGCCC AGCGCGGCTG GCGCGCGGGC
ATGTGCGTGG TGCTGGGGCT GTGCCTGGGG CTGGTGGGGC ACACCACGGC CGTGGCGCTG
GGACTGGCGG CCGTGTTTGC CGCGTCGGCC GTGGCGTTCA CGGTGCTCAA GTTCTGCGGC
GCCGCCTATT TGGCCTATCT GGCCTGGGGG GCGTTGCGGG CGCCGGCCAG CGTGCCCGAG
GAGGCGCCCG CCACGGGCGC GGCGATGGCG CCGGGCGCCC GCGTGCCCGG TGGTGCACTG
CGCATGGTGG GGCGCGGTGT GGTGATGAAC CTGACCAACC CCAAGGTGCT GATCTTCTTC
CTGGCCTTCC TGCCGCAGTT TGCCGACCCC GCGCGCGGCG GCATGGCGCG GCAGATCCTG
GTGCTGGGGG TGGTGTTCAT GCTGGCCACG TTCCTGGTGT TCGGGGCCAT CGCATGCTTC
AGCGGGGCGT TCGGCGCGCT GCTGCAGCGC TCGGCGCGCG CGCAGCGCAT GCTCAACCGC
GTGGCGGGCC TGGTGTTCCT GGGCCTGGCC GTGCGGCTGG CCACAGCCGA GCGCTGA
 
Protein sequence
MPSIETLVAF FGVSVLLALT PGPDNLFVLL QSAQRGWRAG MCVVLGLCLG LVGHTTAVAL 
GLAAVFAASA VAFTVLKFCG AAYLAYLAWG ALRAPASVPE EAPATGAAMA PGARVPGGAL
RMVGRGVVMN LTNPKVLIFF LAFLPQFADP ARGGMARQIL VLGVVFMLAT FLVFGAIACF
SGAFGALLQR SARAQRMLNR VAGLVFLGLA VRLATAER