Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0885 |
Symbol | |
ID | 4671268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 934301 |
End bp | 934957 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639838008 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_985203 |
Protein GI | 121593307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.347055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGA TCGAAACCCT TGTCGCGTTC TTTGGTGTTT CCGTGCTGCT GGCGCTCACG CCGGGGCCCG ACAACCTGTT CGTGCTGCTG CAGTCGGCCC AGCGCGGCTG GCGCGCGGGC ATGTGCGTGG TGCTGGGGCT GTGCCTGGGG CTGGTGGGGC ACACCACGGC CGTGGCGCTG GGACTGGCGG CCGTGTTTGC CGCGTCGGCC GTGGCGTTCA CGGTGCTCAA GTTCTGCGGC GCCGCCTATT TGGCCTATCT GGCCTGGGGG GCGTTGCGGG CGCCGGCCAG CGTGCCCGAG GAGGCGCCCG CCACGGGCGC GGCGATGGCG CCGGGCGCCC GCGTGCCCGG TGGTGCACTG CGCATGGTGG GGCGCGGTGT GGTGATGAAC CTGACCAACC CCAAGGTGCT GATCTTCTTC CTGGCCTTCC TGCCGCAGTT TGCCGACCCC GCGCGCGGCG GCATGGCGCG GCAGATCCTG GTGCTGGGGG TGGTGTTCAT GCTGGCCACG TTCCTGGTGT TCGGGGCCAT CGCATGCTTC AGCGGGGCGT TCGGCGCGCT GCTGCAGCGC TCGGCGCGCG CGCAGCGCAT GCTCAACCGC GTGGCGGGCC TGGTGTTCCT GGGCCTGGCC GTGCGGCTGG CCACAGCCGA GCGCTGA
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Protein sequence | MPSIETLVAF FGVSVLLALT PGPDNLFVLL QSAQRGWRAG MCVVLGLCLG LVGHTTAVAL GLAAVFAASA VAFTVLKFCG AAYLAYLAWG ALRAPASVPE EAPATGAAMA PGARVPGGAL RMVGRGVVMN LTNPKVLIFF LAFLPQFADP ARGGMARQIL VLGVVFMLAT FLVFGAIACF SGAFGALLQR SARAQRMLNR VAGLVFLGLA VRLATAER
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