Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0874 |
Symbol | aspS |
ID | 4671310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 924327 |
End bp | 926138 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639837997 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_985192 |
Protein GI | 121593296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.104539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGC GCTCCCACTA CTGCGGTCTT GTGACCGAAG CCCTCCTGGG CCAAACCGTC ACCCTGTCGG GCTGGGTGAA CCGTCGCCGC GACCATGGCG GCGTGATCTT CATCGACCTG CGCGACCGCG AAGGCTATGT GCAGGTGGTC TGCGACCCTG ACCGTCCCGA GATGTTCAAG GTGGCCGAGG ACGTCCGCAA CGAGTTCTGC GTGCAGGTCA AGGGTTTGGT GCGCGCGCGC CCCGAAGGCA CGACCAACGA CAGCCTCAAG AGCGGCAAGA TCGAGGTGTT GTGCCAGGAG CTCAACGTCC TGAACCCGTC CGTGACGCCG CCCTTCCAGA TGGACGACGA CAACCTGTCG GAAACCACGC GCCTCACGCA CCGCGTGATG GACCTGCGCC GCCCGTACAT GCAGCGCAAC ATGATGCTGC GCTACAAGAC GGCCATCCAG GTGCGCAACT TCCTGGACAA GGAAGGCTTC ATCGACATCG AAACGCCCAT GCTGGGCAAG AGCACGCCCG AGGGGGCGCG CGACTACCTC GTGCCCAGCC GCGTGCACGA CGGTCAGTTC TTCGCGCTGC CGCAGTCGCC CCAGCTCTAC AAGCAGATGC TGATGGTGGC CGGCTACGAC CGCTACTACC AGATCACCAA GTGCTTCCGC GACGAGGATC TGCGCGCCGA CCGCCAGCCC GAGTTCACGC AGATCGACTG CGAGACCTCG TTCCTGAACG AGGAAGAGAT CCGCGCCATC TTCCAGCGCA TGATCAAGGA AGTGTTCCAG CAGCAACTGG GCGTGGACCT GGGTGAATTC CCCACCATGA CCTACCAGGA AGCAGCGCAC CGCTTCGGCT CCGACAAGCC CGACCTGCGC GTGAAGCTCG AATTCACCGA GCTGACCGAC GTCATGAAGG ACGTGGACTT CAAGGTCTTC TCCGGCGCCG CCAACATGAA GGGCGGCCGT GTGGTGGCCC TGCGCGTGCC CGGTGGCGCC CGTGAAGAGG GCGGCCTGTC GCGCGGCGAG ATCGACGGCT ATACCGAGTT CGTGAAGATC TACGGCGCCA AGGGTCTGGC TTACATCAAG GTCAACGATA AGGCCAAGGG CCGTGACGGC CTGCAGTCGC CCATCGTCAA GAACATCCAT GACGCCGCAC TGGCCGAAGT GCTCCAGCGC ACGGGCGCAC AGGACGGCGA CCTGCTGTTC TTTGGCGCCG ACAAGGAAAA AATCGTCAAC GACGCCATCG GCGCACTGCG CCTGAAGGTC GGCCACAGCG AATTCGGCAA GAAGAATGGT CTGTTCGAGA ACCGCTGGGC GCCGCTGTGG GTGGTGGACT TTCCCATGTT CGAGCATGAC GAGGAAGAAG ACCGCTGGGT GGCCGTGCAC CACCCCTTCA CGTCGCCGAA GGACGGCCAT GAGAACCTCA TGGACACCGA CCCCGGCAAG TGCATTGCGA AGGCCTACGA CATGGTGCTG AACGGCTGGG AGCTGGGCGG CGGCTCGGTG CGTATCCACC GCGCTGATGT GCAGGCCAAG GTGTTTGCGG CGCTCAATAT CGGCCCGGAA GACCAGCGCG CGAAGTTCGG CTACCTGCTG GACGCGTTGC AGTACGGCGC GCCTCCGCAC GGCGGCCTGG CCTTCGGCCT GGACCGCCTG ATCACGCTGA TGACGGGAGC CGAGTCCATC CGCGACGTGA TCGCCTTCCC CAAGACCCAG CGCGCCCAGG ATCTGCTGAC CCAGGCCCCT TCGCCTGTGG ACGAAAAGCA GCTGCGCGAA CTGCACATCC GCCTGCGCAA CCCGCTGCCT GCAGCCCACT GA
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Protein sequence | MAMRSHYCGL VTEALLGQTV TLSGWVNRRR DHGGVIFIDL RDREGYVQVV CDPDRPEMFK VAEDVRNEFC VQVKGLVRAR PEGTTNDSLK SGKIEVLCQE LNVLNPSVTP PFQMDDDNLS ETTRLTHRVM DLRRPYMQRN MMLRYKTAIQ VRNFLDKEGF IDIETPMLGK STPEGARDYL VPSRVHDGQF FALPQSPQLY KQMLMVAGYD RYYQITKCFR DEDLRADRQP EFTQIDCETS FLNEEEIRAI FQRMIKEVFQ QQLGVDLGEF PTMTYQEAAH RFGSDKPDLR VKLEFTELTD VMKDVDFKVF SGAANMKGGR VVALRVPGGA REEGGLSRGE IDGYTEFVKI YGAKGLAYIK VNDKAKGRDG LQSPIVKNIH DAALAEVLQR TGAQDGDLLF FGADKEKIVN DAIGALRLKV GHSEFGKKNG LFENRWAPLW VVDFPMFEHD EEEDRWVAVH HPFTSPKDGH ENLMDTDPGK CIAKAYDMVL NGWELGGGSV RIHRADVQAK VFAALNIGPE DQRAKFGYLL DALQYGAPPH GGLAFGLDRL ITLMTGAESI RDVIAFPKTQ RAQDLLTQAP SPVDEKQLRE LHIRLRNPLP AAH
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