| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0872 |
|---|
| Symbol | |
|---|
| ID | 4671404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 923278 |
|---|
| End bp | 923595 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639837995 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_985190 |
|---|
| Protein GI | 121593294 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.616078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATAA TTGAAGGTTT TGCACATTCT TCGCACTTCT TCGTAATGCC TATTTACGCC
TATCGATGCG GTTCCTGCGG CCATGCCAAG GACGTGCTGC AAAAAATCTC CGACGCGCCG
CTCACCGTCT GCCCGTCCTG TGGTGCGCCG GCTTTTTCCA AGCAGCTGAC GGCCGCGGGC
TTTCAACTCA AGGGCACGGG TTGGTATGCC ACCGATTTCA GCGGCCGTGC CAGTGCGCCT
GCTGCGGCAT CGGATGCTCC TAAAACAGAA GCTGCCAGCG CTGCTCCAGC AAGCGCTACG
GCCACTTCTG ACTCCTAA
|
|---|
| Protein sequence | MPIIEGFAHS SHFFVMPIYA YRCGSCGHAK DVLQKISDAP LTVCPSCGAP AFSKQLTAAG
FQLKGTGWYA TDFSGRASAP AAASDAPKTE AASAAPASAT ATSDS
|
|---|
| |