| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0795 |
|---|
| Symbol | |
|---|
| ID | 4671305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 837194 |
|---|
| End bp | 838144 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639837919 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_985115 |
|---|
| Protein GI | 121593219 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.325789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.244316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGT GGCTCGCGCG AAGCCGCGCC ATACACCTCA GCGGTGTGCA GCTGATCTGC
GCTCTAGCTG GGATTTTCAT GGCACTGCTG TTCATGACCG TGATGGCATA CCACTGGGTG
CTGATGCATG GCGTGCGCGA GGGCTGGCCC GTAGTGGGCT CCATGGCACG ACTGGCTGTG
CAGGATGAGC AAGCCCAGCG CGAGCGGTTC ATGCGCGCCA ACATCGATGC GATGGCGCGC
AAGCTCGGAG ACATGCAAGC CCGTGTACTC CAACTGGAAT CGCTGGGTGA GCGTGTGCGA
GGCCTGGCCG GGCTGCCTGC TTCCGAGGTG CAGAGCCTGC CGGGCCGTGG AGGCATGCTG
GTGGCTGGGC GCTCGCTGGG GCTCGACGAA CTGAATGCGG CCTTGGACGA CCTGGTCGCC
ATCACCGGCC GGCGGACGGA TTTGATGACG GTGGCAGAGT CACGCCTCTT TGACCAGCAC
ATCCGCAAGC ACTTGATCCC GACCCAGGTT CCCGTGCGCG ACACGGCTGT TGGTTCGCCG
TTCGGCTGGC GCATTGATCC TCTTACCGGC CAGTCCGCGT TGCATACCGG GCTGGACTTC
TCGGCCGGAA CCGGCACGCC CATCGTGGCC GCGGCCGGCG GCGTGGTGAT CGCCCAGGAG
TGCCACCCCG CCTATGGCAA CATGGTGGAG ATAGACCACG GAAGCCAACT CGTCACCCGC
TACGCCCACG CCTCCAAAAC CCTGGTGAAG GCGGGAGACA TCGTGCGCCG GGGACAGAAA
ATCGCGGAAG TGGGGAGTAC GGGCCGCTCC ACGGGGCCGC ATTTGCATTT CGAAGTGTGG
GTGCAAGGCG TGCCGCAGGA TCCGCAGAAA TTCCTCTTCG CGGGAGAGCC CGCACCGATG
TCACACGCCC TCACGGGGCG CGCGGCCATG GGGCACCTGG CGCACAGGTA G
|
|---|
| Protein sequence | MDAWLARSRA IHLSGVQLIC ALAGIFMALL FMTVMAYHWV LMHGVREGWP VVGSMARLAV
QDEQAQRERF MRANIDAMAR KLGDMQARVL QLESLGERVR GLAGLPASEV QSLPGRGGML
VAGRSLGLDE LNAALDDLVA ITGRRTDLMT VAESRLFDQH IRKHLIPTQV PVRDTAVGSP
FGWRIDPLTG QSALHTGLDF SAGTGTPIVA AAGGVVIAQE CHPAYGNMVE IDHGSQLVTR
YAHASKTLVK AGDIVRRGQK IAEVGSTGRS TGPHLHFEVW VQGVPQDPQK FLFAGEPAPM
SHALTGRAAM GHLAHR
|
|---|
| |