Gene Ajs_0773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0773 
Symbol 
ID4674133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp817815 
End bp820646 
Gene Length2832 bp 
Protein Length943 aa 
Translation table11 
GC content70% 
IMG OID639837896 
Productpolysaccharide deacetylase 
Protein accessionYP_985093 
Protein GI121593197 
COG category[S] Function unknown 
COG ID[COG3868] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.430568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0849732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCC GCTTCCTTTT GCAGTTGTTG CAGTTGTGCA CGCGCCTGGC ATGGGGGCTG 
GCCTTGCTGC CGCTGGCCTG GAGCGCCCAG GCCGCCACGC CCGCGGTGGC GCTGTACTAC
GGCCATGAAA TCCCCCTGGG CGAGTTCCGC GCCTTCGATC TGTTGGTGGT GGACCCCGAC
CACGAGGCGG CGCGCCAGGC CCGCGCGCTG GAGCCCGCCA CCAAGGTGTA TGCCTATGTC
TCGGTGACCG AAGTGCAGCC CTCGCGCGGC TACCACGCGG ACATCCCGGC GGACTGGAAA
CTGGCGCGCA ACCAGGACTG GCAGTCGGAG GTCATCGACC AGAGCGTGGC GGCATGGCCC
GATTTCTTCG CCAGCCGCGT CGTCGCCCCC CTGTGGGAGC GCGGCTTCCG GGGGTTCTTC
CTCGACACGC TGGACTCCTA CCGCCTGGCG GGCACGTTCG ACGAGCAGGC CCAGCAGCAG
GGGCTTGTGC GGGTGATCGA GACACTGCAC CAGCGCTTCC CCGGCATCCG GCTCATCCTC
AACCGGGGTT TCGACATCCT GCCGCAGGTG CGGGGCATGG TCGAGATGGT GGCCGCCGAA
TCGCTCTACC AGCGCTGGAA TGCCAAGACC CGGCGCTACG AGGAAGTGCC CAACCAGGAC
CGGCAATGGC TCATGGACCA GCTGCGCACC GTCCGGCAGC GCGACGGCCT GCCCGTGCTG
GTGATCGACT ACGTCTCGCC GCACGACCGG GCGCTCACGC GCGCCACAGC CCAAAGGATC
CTGCAGGATG GCTTCATCCC CTGGGTCACC GACGCGCAGT TGGCGACCAT CGGCATGGGC
AGCATCGAGC CGGTGCCGCG GCGCGTGCTG GTGCTCTACA ACGGCGGCAA ATCGCCCGCG
CTCAACTACG CCAACGCCCA CCGCTTCCTG CAGATGCCGC TCAACCACAT GGGCTACGTG
ACGGACTACG TGGACGTGCG CGACAGCCTG CCCGGCCTGG TGGCGCGCGA CCGCTATGCC
GGCGTGGTGA GCTGGTTCTC CGGCTACGTG CCTGCGGCGA AACGCGCCGG CCTGAGCCAA
TGGCTGCAGG CGCGCATCCA CGAAGGCATG CCGCTGGCGG TGGTGGGCGA CTGGGGCATG
GCGCCCGACC GCGTCCTCAC GCGTAGCCTG GGGCTGGCGC TCGACAGGGC CGAGCCCCAG
GGCGCATTGC GCCAGGTGCA GCTCGCCCCC ATGATGGGGC TGGAGAACCC GCTCCCCCTG
CCCTCCCGGC AGACCGAACT GGTGCAGCTG GCGCCCGACA TGGCGCGCCA GGCCCAGCCC
CTGGTGGAGC TGCGCGACGC CCGCGGCCGC ACCTTCGTTG GCGGCGCCAT CACCCCCTGG
GGCGGCTTCA TTCTCGACCC CAACGTGCTG TTCGAGATCC CCGGAACGGA GGACGCGCGC
TGGCTGGTCG ATCCCTTCGC CTTCCTGCAG CAGGCCCTGC GCCTGCCCGC CATTCCGGTG
CCCGACACGA CCACGGAGAA CGGCCGCCGC CTGTTGCTGG CCCATGTGGA CGGCGACGGC
TTTCCCTCGC TGGCGGAGTT CCCCGGCAGC CCGCTGGCCG CCCAGGTGCT GCTCAAGGAG
ATATTCGAGA AGTACCGCAT CCCCCAGACC ATGTCCGTCA TCGAAGCCGA GGTGGCCCCC
GACGGCCTGT ACCCCGGCCT GAGCCCGCGC ATGGAGGAAG TGGCGCGCAA GATGTTCCGC
CTGCCCCACA TCGAGGTCGG CAGCCATACC TATAGCCACC CCTTCCTGTG GGACGCGAAC
GTGCAGCACG GTCTTTTCAA GGAGAACCCG GAGGCGGCGC AGTCCCTGGT GGTTCCCGGC
TACACCATGG ACCTGGAGCG CGAGATCGTG GGCTCAAGCC ACTACATCAA CGAGCGCCTG
GCGCCCAGCG GCAAGCCCGT CAAGGTCCTG CAATGGACGG GCGACACGGC GCCCAGCGCC
CGTGCGCTGG AGATCACCCA CCGCGCCGGG CTGCTGAACA TCAACGGCGG CGACACCTCC
ATCAGCCGCG CCAACCCCTC GCTCACGGCC GTGGGGGCGC TGGGCATCCG CAAGGGCGGG
TTCTTGCAGG TCTACGCCCC CATCACCAAC GAGAACATCT ACACCAACCT GTGGACGGGG
CCGTACTACG GTTTCGAGCG CGCCATAGAG ACCTTCGAGA TGACGGACAG CCCCCGGCGC
ATCAAGCCCG TGGGCATCTA CTACCACACC TACTCGGCCA GCAAGCCCGC CGCGCTCAAG
GCGCTGAAGA AAGTCTACGA CTGGGCCCTC GCGCAGCCCC TGCACCCCGT ACACGCCTCC
GAGTTCGTCA CCAAGGTGCA GGACTTCTAC GACTACGCCA TGGCCCGCGA TGGCGAGGGC
TGGCGCCTGC GCAGCAGCAA TGGCGCCCTG CGCACCGTGC GGCTGCCCCC GGCGCTGGGG
CTGCCCCGGC TAGGCGCCAG CCAGGCCGTG GCGGGCTGGC GCCGGGGCGG CGAAGGCCTG
TACGTGCACC TGAGCGGACC GTCCGCCTTC CTGCAAACGG ACGGCCGCGA GGCCGCCACC
CCCTACCTGC ACGACGCCAA CGCCCGCCTG GTCGACTGGC AGGCCGAGGG CGATGGCCGG
CGCGTGCAAT TCACGCTCCA GGGCCATGTG CCGCTGGAGT TTGCCCTGGC CAACACCCAG
GCCTGCCAGG TGCGCGCCGG CCAGCGCACC CTCACCGCCC TGCGCCCTGC CGCACAGGAC
CGCACCGCAG TGCAACAGTT CAAGCTGCCC GATGCCGCCG CCCAGATCCA GATCCTCTGC
CCAGAGCGTT GA
 
Protein sequence
MAFRFLLQLL QLCTRLAWGL ALLPLAWSAQ AATPAVALYY GHEIPLGEFR AFDLLVVDPD 
HEAARQARAL EPATKVYAYV SVTEVQPSRG YHADIPADWK LARNQDWQSE VIDQSVAAWP
DFFASRVVAP LWERGFRGFF LDTLDSYRLA GTFDEQAQQQ GLVRVIETLH QRFPGIRLIL
NRGFDILPQV RGMVEMVAAE SLYQRWNAKT RRYEEVPNQD RQWLMDQLRT VRQRDGLPVL
VIDYVSPHDR ALTRATAQRI LQDGFIPWVT DAQLATIGMG SIEPVPRRVL VLYNGGKSPA
LNYANAHRFL QMPLNHMGYV TDYVDVRDSL PGLVARDRYA GVVSWFSGYV PAAKRAGLSQ
WLQARIHEGM PLAVVGDWGM APDRVLTRSL GLALDRAEPQ GALRQVQLAP MMGLENPLPL
PSRQTELVQL APDMARQAQP LVELRDARGR TFVGGAITPW GGFILDPNVL FEIPGTEDAR
WLVDPFAFLQ QALRLPAIPV PDTTTENGRR LLLAHVDGDG FPSLAEFPGS PLAAQVLLKE
IFEKYRIPQT MSVIEAEVAP DGLYPGLSPR MEEVARKMFR LPHIEVGSHT YSHPFLWDAN
VQHGLFKENP EAAQSLVVPG YTMDLEREIV GSSHYINERL APSGKPVKVL QWTGDTAPSA
RALEITHRAG LLNINGGDTS ISRANPSLTA VGALGIRKGG FLQVYAPITN ENIYTNLWTG
PYYGFERAIE TFEMTDSPRR IKPVGIYYHT YSASKPAALK ALKKVYDWAL AQPLHPVHAS
EFVTKVQDFY DYAMARDGEG WRLRSSNGAL RTVRLPPALG LPRLGASQAV AGWRRGGEGL
YVHLSGPSAF LQTDGREAAT PYLHDANARL VDWQAEGDGR RVQFTLQGHV PLEFALANTQ
ACQVRAGQRT LTALRPAAQD RTAVQQFKLP DAAAQIQILC PER