Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0773 |
Symbol | |
ID | 4674133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 817815 |
End bp | 820646 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837896 |
Product | polysaccharide deacetylase |
Protein accession | YP_985093 |
Protein GI | 121593197 |
COG category | [S] Function unknown |
COG ID | [COG3868] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.430568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0849732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTCC GCTTCCTTTT GCAGTTGTTG CAGTTGTGCA CGCGCCTGGC ATGGGGGCTG GCCTTGCTGC CGCTGGCCTG GAGCGCCCAG GCCGCCACGC CCGCGGTGGC GCTGTACTAC GGCCATGAAA TCCCCCTGGG CGAGTTCCGC GCCTTCGATC TGTTGGTGGT GGACCCCGAC CACGAGGCGG CGCGCCAGGC CCGCGCGCTG GAGCCCGCCA CCAAGGTGTA TGCCTATGTC TCGGTGACCG AAGTGCAGCC CTCGCGCGGC TACCACGCGG ACATCCCGGC GGACTGGAAA CTGGCGCGCA ACCAGGACTG GCAGTCGGAG GTCATCGACC AGAGCGTGGC GGCATGGCCC GATTTCTTCG CCAGCCGCGT CGTCGCCCCC CTGTGGGAGC GCGGCTTCCG GGGGTTCTTC CTCGACACGC TGGACTCCTA CCGCCTGGCG GGCACGTTCG ACGAGCAGGC CCAGCAGCAG GGGCTTGTGC GGGTGATCGA GACACTGCAC CAGCGCTTCC CCGGCATCCG GCTCATCCTC AACCGGGGTT TCGACATCCT GCCGCAGGTG CGGGGCATGG TCGAGATGGT GGCCGCCGAA TCGCTCTACC AGCGCTGGAA TGCCAAGACC CGGCGCTACG AGGAAGTGCC CAACCAGGAC CGGCAATGGC TCATGGACCA GCTGCGCACC GTCCGGCAGC GCGACGGCCT GCCCGTGCTG GTGATCGACT ACGTCTCGCC GCACGACCGG GCGCTCACGC GCGCCACAGC CCAAAGGATC CTGCAGGATG GCTTCATCCC CTGGGTCACC GACGCGCAGT TGGCGACCAT CGGCATGGGC AGCATCGAGC CGGTGCCGCG GCGCGTGCTG GTGCTCTACA ACGGCGGCAA ATCGCCCGCG CTCAACTACG CCAACGCCCA CCGCTTCCTG CAGATGCCGC TCAACCACAT GGGCTACGTG ACGGACTACG TGGACGTGCG CGACAGCCTG CCCGGCCTGG TGGCGCGCGA CCGCTATGCC GGCGTGGTGA GCTGGTTCTC CGGCTACGTG CCTGCGGCGA AACGCGCCGG CCTGAGCCAA TGGCTGCAGG CGCGCATCCA CGAAGGCATG CCGCTGGCGG TGGTGGGCGA CTGGGGCATG GCGCCCGACC GCGTCCTCAC GCGTAGCCTG GGGCTGGCGC TCGACAGGGC CGAGCCCCAG GGCGCATTGC GCCAGGTGCA GCTCGCCCCC ATGATGGGGC TGGAGAACCC GCTCCCCCTG CCCTCCCGGC AGACCGAACT GGTGCAGCTG GCGCCCGACA TGGCGCGCCA GGCCCAGCCC CTGGTGGAGC TGCGCGACGC CCGCGGCCGC ACCTTCGTTG GCGGCGCCAT CACCCCCTGG GGCGGCTTCA TTCTCGACCC CAACGTGCTG TTCGAGATCC CCGGAACGGA GGACGCGCGC TGGCTGGTCG ATCCCTTCGC CTTCCTGCAG CAGGCCCTGC GCCTGCCCGC CATTCCGGTG CCCGACACGA CCACGGAGAA CGGCCGCCGC CTGTTGCTGG CCCATGTGGA CGGCGACGGC TTTCCCTCGC TGGCGGAGTT CCCCGGCAGC CCGCTGGCCG CCCAGGTGCT GCTCAAGGAG ATATTCGAGA AGTACCGCAT CCCCCAGACC ATGTCCGTCA TCGAAGCCGA GGTGGCCCCC GACGGCCTGT ACCCCGGCCT GAGCCCGCGC ATGGAGGAAG TGGCGCGCAA GATGTTCCGC CTGCCCCACA TCGAGGTCGG CAGCCATACC TATAGCCACC CCTTCCTGTG GGACGCGAAC GTGCAGCACG GTCTTTTCAA GGAGAACCCG GAGGCGGCGC AGTCCCTGGT GGTTCCCGGC TACACCATGG ACCTGGAGCG CGAGATCGTG GGCTCAAGCC ACTACATCAA CGAGCGCCTG GCGCCCAGCG GCAAGCCCGT CAAGGTCCTG CAATGGACGG GCGACACGGC GCCCAGCGCC CGTGCGCTGG AGATCACCCA CCGCGCCGGG CTGCTGAACA TCAACGGCGG CGACACCTCC ATCAGCCGCG CCAACCCCTC GCTCACGGCC GTGGGGGCGC TGGGCATCCG CAAGGGCGGG TTCTTGCAGG TCTACGCCCC CATCACCAAC GAGAACATCT ACACCAACCT GTGGACGGGG CCGTACTACG GTTTCGAGCG CGCCATAGAG ACCTTCGAGA TGACGGACAG CCCCCGGCGC ATCAAGCCCG TGGGCATCTA CTACCACACC TACTCGGCCA GCAAGCCCGC CGCGCTCAAG GCGCTGAAGA AAGTCTACGA CTGGGCCCTC GCGCAGCCCC TGCACCCCGT ACACGCCTCC GAGTTCGTCA CCAAGGTGCA GGACTTCTAC GACTACGCCA TGGCCCGCGA TGGCGAGGGC TGGCGCCTGC GCAGCAGCAA TGGCGCCCTG CGCACCGTGC GGCTGCCCCC GGCGCTGGGG CTGCCCCGGC TAGGCGCCAG CCAGGCCGTG GCGGGCTGGC GCCGGGGCGG CGAAGGCCTG TACGTGCACC TGAGCGGACC GTCCGCCTTC CTGCAAACGG ACGGCCGCGA GGCCGCCACC CCCTACCTGC ACGACGCCAA CGCCCGCCTG GTCGACTGGC AGGCCGAGGG CGATGGCCGG CGCGTGCAAT TCACGCTCCA GGGCCATGTG CCGCTGGAGT TTGCCCTGGC CAACACCCAG GCCTGCCAGG TGCGCGCCGG CCAGCGCACC CTCACCGCCC TGCGCCCTGC CGCACAGGAC CGCACCGCAG TGCAACAGTT CAAGCTGCCC GATGCCGCCG CCCAGATCCA GATCCTCTGC CCAGAGCGTT GA
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Protein sequence | MAFRFLLQLL QLCTRLAWGL ALLPLAWSAQ AATPAVALYY GHEIPLGEFR AFDLLVVDPD HEAARQARAL EPATKVYAYV SVTEVQPSRG YHADIPADWK LARNQDWQSE VIDQSVAAWP DFFASRVVAP LWERGFRGFF LDTLDSYRLA GTFDEQAQQQ GLVRVIETLH QRFPGIRLIL NRGFDILPQV RGMVEMVAAE SLYQRWNAKT RRYEEVPNQD RQWLMDQLRT VRQRDGLPVL VIDYVSPHDR ALTRATAQRI LQDGFIPWVT DAQLATIGMG SIEPVPRRVL VLYNGGKSPA LNYANAHRFL QMPLNHMGYV TDYVDVRDSL PGLVARDRYA GVVSWFSGYV PAAKRAGLSQ WLQARIHEGM PLAVVGDWGM APDRVLTRSL GLALDRAEPQ GALRQVQLAP MMGLENPLPL PSRQTELVQL APDMARQAQP LVELRDARGR TFVGGAITPW GGFILDPNVL FEIPGTEDAR WLVDPFAFLQ QALRLPAIPV PDTTTENGRR LLLAHVDGDG FPSLAEFPGS PLAAQVLLKE IFEKYRIPQT MSVIEAEVAP DGLYPGLSPR MEEVARKMFR LPHIEVGSHT YSHPFLWDAN VQHGLFKENP EAAQSLVVPG YTMDLEREIV GSSHYINERL APSGKPVKVL QWTGDTAPSA RALEITHRAG LLNINGGDTS ISRANPSLTA VGALGIRKGG FLQVYAPITN ENIYTNLWTG PYYGFERAIE TFEMTDSPRR IKPVGIYYHT YSASKPAALK ALKKVYDWAL AQPLHPVHAS EFVTKVQDFY DYAMARDGEG WRLRSSNGAL RTVRLPPALG LPRLGASQAV AGWRRGGEGL YVHLSGPSAF LQTDGREAAT PYLHDANARL VDWQAEGDGR RVQFTLQGHV PLEFALANTQ ACQVRAGQRT LTALRPAAQD RTAVQQFKLP DAAAQIQILC PER
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