Gene Ajs_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0688 
Symbol 
ID4670902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp725429 
End bp727000 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content69% 
IMG OID639837811 
Productextracellular solute-binding protein 
Protein accessionYP_985008 
Protein GI121593112 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.110035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.066295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAATA TGGCCCTGGC GCTTGTACTG CAAGCGCTAG CAGCTATATT TTTGGTAGCT 
AATGCGCAAA CCATCCGTGT GGCCAACCAG GGCGATGCGC TGTCGATGGA CCCACATGCG
CTCAATGAAT CGCTGCAGCT CAGCCTGACC GGCAATGTGT ACGAGCCTCT GGTGGGACGC
AACAAGGATC TGAGCCTGGT GCCTGCGCTG GCGCTGGCCT GGCGTGCGAC CACCCCCACC
GTATGGCGCT TCGAGTTGCG CCGCGGCGTG TCCTTCCACG ACGGTGCGCT TTTCACGGCC
GACGATGCGG TGTTTTCGCT GCGGCGCGCG CAGTCCGAAG GCTCGGACAT GCGCAGTTAC
CTGAGCGGCG TGCGCGAGGT GCGCAAGCTG GACGCGCACA CCATCGAGAT CGAAACCCGC
GAGCCCACGC CACTGCTGCC GGCCCTGCTG TCGCACGTCT ACATGATGAA CCAGCGCTGG
AGCGAGGCGC AGGGCATCGC GGAGGTAGGC GAGGCGCGCG GAGCCGCGGG GCAGGCCGCC
GCGCTGCGCG CCAATGGCAC GGGGCCGTTC CGCCTGGCCG AGCGCCGCCC GCAGCAGCGC
ACCGTGTTCG AGCGCAACAC GCGCTACTGG GGCACCATCG AGAGCAACGC ACGCCAAGTC
GTCTTCCTGC CCATTCCGGA CAACGAGGCG CGCGTGGCCG CGCTGCTGGC CGGCCGCGTG
GACGTGATGG AGCCCGTGCC GGTACAGGAC ATCGAACGCG TGAGCGCCGC CGGACTGGTG
CGCGTGGTCA CGGGGCCCGA GTTGCGCACG CTGTTCCTGG GCATGGACCA GCACAGCGAC
GAGCTGCCGT ACGCCAGCGT GCGCGGCGCC AACCCCTTCA AGGACCGGCG CGTGCGCCAG
GCTTTCTACC AGGCCATCGA CATTGATGCG CTCATCAAGA ACGTGATGCG CGGCGCCGCC
ACGCCCGCCG CGCTCATCGT GGGACCGGGC GTCAATGGCT TTCAGTCCGA CGTCAAGCGG
CTGCCGCACG ACGTGGCGGC CGCGCGCGCG CTCATGGCGC AGGCCGGCTA TGGCGAGGGC
TTCGCGCTCA CGCTGGACTG CCCCAGCGAC CGCTATGTGA ACGACGCGGC GCTGTGCACC
GCCATCGCTG CACAGCTGGC GACCCTGCAG GTGCGCGTGA CGGTGCGCGC GGAGCCCAAG
GCGCAGTACT ACCCGCGCAT CCTGCGACGC GACGCGGGCT TCTACCTGAT GGGCTGGACG
CCCTCCACCT ACGACGCACA CGGTGCGCTG AACGCGCTGG CGGCCTGCCC GCGCGGCGAA
GGCGCGGGCC ACTTCAACCT GGGGGGCTAT TGCAACCCGC GGCTGGACGC GCTGCTGCTG
CAGGTCCAGA CGCAGACCGA CAAGACCCGG CGCGATGTGC TGCTGCGCGA GGCTTTGCTG
CTGCAGGCCG CCGACATTGC CTACATCCCG CTGCACCAGC AGGCCCTGGC CTGGGGCGTG
TCCAAGAAGA TCCGCCTGGT GCAGATGGCC GACAACACCA TGCCTTTCAA GTGGATGGGC
GTGGGCCCCT GA
 
Protein sequence
MRNMALALVL QALAAIFLVA NAQTIRVANQ GDALSMDPHA LNESLQLSLT GNVYEPLVGR 
NKDLSLVPAL ALAWRATTPT VWRFELRRGV SFHDGALFTA DDAVFSLRRA QSEGSDMRSY
LSGVREVRKL DAHTIEIETR EPTPLLPALL SHVYMMNQRW SEAQGIAEVG EARGAAGQAA
ALRANGTGPF RLAERRPQQR TVFERNTRYW GTIESNARQV VFLPIPDNEA RVAALLAGRV
DVMEPVPVQD IERVSAAGLV RVVTGPELRT LFLGMDQHSD ELPYASVRGA NPFKDRRVRQ
AFYQAIDIDA LIKNVMRGAA TPAALIVGPG VNGFQSDVKR LPHDVAAARA LMAQAGYGEG
FALTLDCPSD RYVNDAALCT AIAAQLATLQ VRVTVRAEPK AQYYPRILRR DAGFYLMGWT
PSTYDAHGAL NALAACPRGE GAGHFNLGGY CNPRLDALLL QVQTQTDKTR RDVLLREALL
LQAADIAYIP LHQQALAWGV SKKIRLVQMA DNTMPFKWMG VGP