| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0683 |
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| Symbol | |
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| ID | 4671008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 718543 |
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| End bp | 719667 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639837807 |
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| Product | porin |
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| Protein accession | YP_985004 |
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| Protein GI | 121593108 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.925989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.138138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGT TTTCCCTCAA AACCATCACC TTGGCAGTAG GTGCCTTGTG CGCAACGGGC
GCAAGTTTCG CCCAGTCTTC CGTGACGCTG TACGGTATTG CTGACCTTGG GGTTACCTTC
GTTGATGGCA ACGATAGCTG GAACGGCCTT ACTTCTGGCA ACAACCTGAC CAGTCGCCTT
GGCGTGCGTG GTACGGAAGA CCTGGGCGGC GGCCTTAAGG CCAACTTCCG CCTGGAAGGC
GGTATCAATC TGGACGTGGG CGATGGCGCT TCCGGCTACG CAGGCGCGAC TGCTGGTTCG
GGTTTTGCAT TCAAGCGTAA TTCCACTGTG GGCCTGCAAG GCGGCTTTGG AGAAGTGCGC
ATGGGTCGCG AGTTGACCGC CGCCTACAAC GCCGTCGCTC GTTACGATGT GTTCGGTTCC
GTGGGTCTGG GTGCATCCCA ACTGTGGGGC GACGGTGGCA TCAGCGATGC GACTGGGCTG
AGCACCACTG CACGCACGAC CAACCTGCGT GTCAGCAACA TGGTGACCTA CTTGACGCCC
AACTTTGCGG GCTTCAAAGC CGCTGTGAAC TACGGCTTTG GTGAAGTGGC TGGCGCCAAC
AGCAACCGCC GCTACATGAG CCTGGGCGCA AACTACGACA ACGGCCCCAT CAGCGCAGGT
CTGGGTCTGG AGCGCCTGAG CCGCGACGTT TCGACAGTGG CAGCTACCGC GCAGGGGGGT
GATATCTCCG CCTGGAGCCT GGGTGGCTCT TATGACTTCG GCGTCGCCAA GCTTCTGGCT
GGCTATCGTC AATCCAAGGT TGATGACTTC GATGCAGTGC TTGGCGCTGA AAACAAGCGT
AAGGGCTACA TGCTGGCGGT GACTGCACCG GTCGGCGGCA GTGGTTTGGT GCGTGCCGCC
TACAACCGCT ATGAAGATGA GCAAACCGCT GCAGCCGATG CCAAGGCCGA TCACTTCGCG
ATCGGTTATG TGCACAGCCT GTCCAAGCGC ACGTCCTTGT ATGGCACCTA CGCGTACATC
AAGAACAAGA ACAATGGCAC GCGCTTCAGC ATCAACGGCA GTACCAACGG TCTCGACAAC
GGCAAGCAGC AAGGCTTGCA GGTCGGCGTG ACCCACTCCT TCTGA
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| Protein sequence | MRLFSLKTIT LAVGALCATG ASFAQSSVTL YGIADLGVTF VDGNDSWNGL TSGNNLTSRL
GVRGTEDLGG GLKANFRLEG GINLDVGDGA SGYAGATAGS GFAFKRNSTV GLQGGFGEVR
MGRELTAAYN AVARYDVFGS VGLGASQLWG DGGISDATGL STTARTTNLR VSNMVTYLTP
NFAGFKAAVN YGFGEVAGAN SNRRYMSLGA NYDNGPISAG LGLERLSRDV STVAATAQGG
DISAWSLGGS YDFGVAKLLA GYRQSKVDDF DAVLGAENKR KGYMLAVTAP VGGSGLVRAA
YNRYEDEQTA AADAKADHFA IGYVHSLSKR TSLYGTYAYI KNKNNGTRFS INGSTNGLDN
GKQQGLQVGV THSF
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