| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0682 |
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| Symbol | |
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| ID | 4670550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 717222 |
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| End bp | 718310 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639837806 |
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| Product | porin |
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| Protein accession | YP_985003 |
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| Protein GI | 121593107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.821761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.272491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CTCTGATTGC ACTGGCAGTG CTGGCTGCTT CCGGCGCCGC AATGGCCCAA
TCCTCCGTGA CGCTGTTCGG TATCGTTGAC ACCGCTTTCG GCTACGTGGA CAACGCTAAC
GCCGCTGGCG ACAGCGTGTA TGGCCTGAGC ACCAGCGGCA ACGCAACGAG CCGTCTGGGC
TTCCACGGCG TGGAAGACCT GGGTGGCGGT CTGAAGGCTG GCTTCTGGCT GGAAGGCGAA
ATCTTCGGTG ACGACGGCAA TGCTTCTGGC TTCAATTTCA AGCGTCGTTC CACGGTCAGC
CTGGCTGGTG GTTTCGGTGA AGTGCGCCTG GGCCGTGACT ATACCCCTGG CTACTCCAAG
TTCATCTCCT ACGACCTGTT CGGCCAGACC GGTATTGGTC AGTTCATGGG CTGGCGCGAT
TGGGGAACCA ATTCGGATTT CCAAACGCGC GTGTCTACTG CTGACGCAAA CAATATGCGT
GCTAGTAATA TTGTGAGTTA CTACACGCCC AACTTTAGCG GGTTTACCGG TGGCTTGGGT
TATGGTTTCG ATGAGCAGGT ATCTGGCAAG AACGGACGTT ATGTCGGTGG TTTTGTTGCC
TATGACAATG GTCCCCTGAG CATTGCAGTG TCCTATGATC AGCGTGAACT CCTGGGTTCT
GTGGGGCCCG TCGCAACGGC TGTACCTTTC ACCGGCTCGC GTGACACGTT GACTGTGGGT
GCTTCTTACG ACCTGAATGT TGTGAAGCTC AGCACGATTT TGCAGCAATC GAAGTACAAG
ATTGATGGCG CTGGCAGCGA TAAGTTTAAT GCGTACGCTC TGGGTGCTTC TGCCCCGCTG
GGTGCAGGCG AAGTCAAGCT GCAGTACGCT CTGTACGACC AGAAGGCCAT CGACTCCAAG
GCTCACCAGA TCAGCCTGGG TTATGTCCAC AACCTGTCCA AGCGTACGGC TCTGTACGGC
ACCGTGGCTT ACCTGAAGAA CAAGGACGCT TCCAACCTGG CTCTGCCCAC CAAGGGTCTG
ACAGTTGACG GCCCCGGCGC TGGCGAGAAC CAGACTGGCG TGCAACTGGG TATTCGCCAC
TCCTTCTAA
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| Protein sequence | MKKSLIALAV LAASGAAMAQ SSVTLFGIVD TAFGYVDNAN AAGDSVYGLS TSGNATSRLG
FHGVEDLGGG LKAGFWLEGE IFGDDGNASG FNFKRRSTVS LAGGFGEVRL GRDYTPGYSK
FISYDLFGQT GIGQFMGWRD WGTNSDFQTR VSTADANNMR ASNIVSYYTP NFSGFTGGLG
YGFDEQVSGK NGRYVGGFVA YDNGPLSIAV SYDQRELLGS VGPVATAVPF TGSRDTLTVG
ASYDLNVVKL STILQQSKYK IDGAGSDKFN AYALGASAPL GAGEVKLQYA LYDQKAIDSK
AHQISLGYVH NLSKRTALYG TVAYLKNKDA SNLALPTKGL TVDGPGAGEN QTGVQLGIRH
SF
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