| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0679 |
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| Symbol | |
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| ID | 4671445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 713942 |
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| End bp | 715504 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837803 |
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| Product | threonine dehydratase |
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| Protein accession | YP_985000 |
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| Protein GI | 121593104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0606689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.228873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CTCTCACCCC GTTCGATTAC CTGACAAAGA TCCTCACCGC GCGTGTCTAT
GACGTGGCGG TGGAGTCCGA CCTGCAGCCC GCCCGCGCCC TGTCGCGGCG GCTGCACAAC
AAGGTGCTGC TCAAGCGCGA GGACCAGCAG CCCGTCTTCA GCTTCAAGCT GCGCGGCGCC
TACAACAAGA TGGCGCAGCT CTCGCCCGAG CAGCTGGCGC GCGGCGTGAT CTGCGCCTCG
GCCGGCAACC ACGCGCAGGG CGTGGCGATG AGCGCCAGCA AGCTGGGCAC GCGCGCCGTG
ATCGTGATGC CCACCACCAC GCCGCAGCTC AAGATCGATG CGGTGAAGAC GCTGGGCGGC
GAAGTGGTGC TGAGCGGCGA GAGCTATTCC GACGCCTACG AGCACGCCGC GCAGCTGCAA
AAGGAAGAAG GCCTGACCTT CGTGCACCCC TTCGACGACC CGGACGTGAT CGCCGGCCAG
GGCACGATCG CCATGGAGAT CCTGCGGCAG GTGCAGCAGC TGGGCGGCAA GCTGGATGCC
GTGTTCGTCG CCATCGGCGG CGGCGGGCTG ATCGCCGGCG TGTCCAACTA CATCAAGGCC
GTGTGCCCTG GCATCAAGGT CATCGGCGTG CAGATGAACG ACTCGGACGC CATGGCGCAA
TCGGTCAAGG CGCATCAGCG CGTCACGCTG CCGGACGTGG GCCTGTTCTC CGACGGCACG
GCCGTGAAAC TGGTGGGCGA GGAAACCTTC CGCGTCGCGC AGAACCTGGT GGACGACTAC
GTGATCGTCG ACACCGATGC CGTCTGCGCC GCGATCAAGG ACATCTTCGT GGACACACGC
AGCATCGTGG AGCCCGCGGG CGCCCTGGCC GTGGCCGCCA TCAAGCAGTA CGTGGCCAAG
CACAAGACCA AGGGTGAAAC CTACGCCGCC ATCCTGTGCG GCGCCAACAT GAACTTCGAC
CGGCTGCGCT TCGTGGCCGA GCGCGCCGAG GTGGGCGAGG AACGCGAAGC CCTGTTCGCC
GTCACCATCC CCGAGGAGCG CGGCAGCTTC AAGCGCTTTT GCGAGGTGGT GGGGGCCCTG
CCCGGCGGAC CGCGCAACGT GACCGAGTTC AACTACCGCA TCAGCCACGA GCGGCGCGCC
CATGTGTTCG TGGGCCTGTC CACCACGGGC CGCGGCGAGT CCGAGAAGAT CGCGCGCAAC
TTCCACAAGC ATGGCTTCGA GGCGCTGGAC CTCACGCACG ACGAACTGGC CAAGGAGCAC
CTGCGCCACC TCGTCGGCGG CCATTCGGCG CTGGCGCGCG ACGAGCGGCT GATGCGCTTC
ACCTTCCCCG AGCGCCCCGG CGCGCTGTTC AAGTTCCTGA GCCTGATGCA GCCCACCTGG
AACATCTCGC TGTTCCACTA CCGCAACCAG GGCGCGGACT ATGGGCGCAT CCTCGTGGGC
ATGCAGGTGC CGGCCGACGA CGCAGCGCAG TTCGATGCCT TCCTGCAGAC GCTGGGCTAC
CCCTATGTCG AGGAAACGCA GAACCCGGCC TACCGCCTGT TCCTGCAGGC CAACGGCGCA
TGA
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| Protein sequence | MTQPLTPFDY LTKILTARVY DVAVESDLQP ARALSRRLHN KVLLKREDQQ PVFSFKLRGA
YNKMAQLSPE QLARGVICAS AGNHAQGVAM SASKLGTRAV IVMPTTTPQL KIDAVKTLGG
EVVLSGESYS DAYEHAAQLQ KEEGLTFVHP FDDPDVIAGQ GTIAMEILRQ VQQLGGKLDA
VFVAIGGGGL IAGVSNYIKA VCPGIKVIGV QMNDSDAMAQ SVKAHQRVTL PDVGLFSDGT
AVKLVGEETF RVAQNLVDDY VIVDTDAVCA AIKDIFVDTR SIVEPAGALA VAAIKQYVAK
HKTKGETYAA ILCGANMNFD RLRFVAERAE VGEEREALFA VTIPEERGSF KRFCEVVGAL
PGGPRNVTEF NYRISHERRA HVFVGLSTTG RGESEKIARN FHKHGFEALD LTHDELAKEH
LRHLVGGHSA LARDERLMRF TFPERPGALF KFLSLMQPTW NISLFHYRNQ GADYGRILVG
MQVPADDAAQ FDAFLQTLGY PYVEETQNPA YRLFLQANGA
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