Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0663 |
Symbol | |
ID | 4672257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 698895 |
End bp | 700124 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639837787 |
Product | general secretion pathway protein F |
Protein accession | YP_984984 |
Protein GI | 121593088 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.7077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCCT ATTCCTTCGA AGCCCTGGAC GCCCAAGGCC ATGTGCGCCG CGGCACCCTG GAGGCCGACA GCCCCAAGGC CGCCCGCAGC CTGCTGCGCG CCCAGGCCCT GGTGCCCCTG GATGTGGAGG CGCTGGCCGC TGGCACCGCC CCCGGAACAC CCCCCACGCT GGCGCAGCGG CTGTTCACGC GGCCGGTGTT CAACGCCACG GGGCTGGGCG TGTGGACGCG CCAGCTCGCC GGGCTGGTGG GCTCGGGCCT GCCGCTGGAG CGTGCGCTGA CCGCGCTCGC CGAAGAGGCG GACGACGAGC GCCAGCGCCA CCTGCTGGCC GCGCTGCGCG CCGAGGTCAA CGCCGGCTCC ACCTTCGCAC GTGCGCTGGC GCAGCACCCG CGCGAGTTCT CCGACATCTA CTGCGCCGTG ATCGGCGCGG GCGAGTCCAG CGGCGGCCTG GCCGAAGTGC TGGACAGCCT GGCGGACGAT CTGGAGCAGC GCCAGGCCTT GCGCGCCAAG CTCATCGGCG CCGCGCTGTA CCCGGCCATC GTCACCGTGA TCGCGATCGT CATCGTGCTG TTCCTGGTGG GCTACGTGGT ACCGCAGGTG GCCAGCGTAT TCGCGGGCAC CAAGCGCGCC CTGCCCTTCC TCACGGTGGC CATGCTGGCC TTGAGCGACG TGGTGCGCAA CTACGGCTGG GCGTTGCTGG GCGGGCTGGT CCTGCTGGCG TTCGGCGCCC GCGCCGCGCT GGCCCAGCCG CGGCTGCGCG AGAAGTTCGA CGCCGCCTGG TTGCGCCTGC CGCTCGTCGG CAAGCTGGCG CGCGGCTACA ACGCGGCGCG TTTCGCCGGC ACATTGGCCA TGCTGGCAGG CGCGGGCGTG CCCATTCTCA AGGCGCTGCA GGCCGCGGCC GAGACGCTGA ACAACCGCGC CCTGCGCGCG GACGCACTCG ACGCGCTGGT GCTGGTGCGC GAGGGCGCGC CGCTGGCCTC GGCACTGGCG CAGAAAAAGC GGTTCCCCGG CCTGGTGGCC ATGTTCGCGC GGCTGGGCGA ACAGACGGGC CAGTTGCCCA CCATGCTGCA GCGCGCCGCC ACGCAATTGG GCACCGAGGT GCAGCGCCGC GCCATGCAAC TGGCCACGGT GCTGGAGCCG CTGCTCATCG TGGCCATGGG CGGCATCGTG ATGTTGATCG TGCTGGCGGT GCTCATGCCG ATCATCCAGC TCAACCAGTT CGTCAAATGA
|
Protein sequence | MPAYSFEALD AQGHVRRGTL EADSPKAARS LLRAQALVPL DVEALAAGTA PGTPPTLAQR LFTRPVFNAT GLGVWTRQLA GLVGSGLPLE RALTALAEEA DDERQRHLLA ALRAEVNAGS TFARALAQHP REFSDIYCAV IGAGESSGGL AEVLDSLADD LEQRQALRAK LIGAALYPAI VTVIAIVIVL FLVGYVVPQV ASVFAGTKRA LPFLTVAMLA LSDVVRNYGW ALLGGLVLLA FGARAALAQP RLREKFDAAW LRLPLVGKLA RGYNAARFAG TLAMLAGAGV PILKALQAAA ETLNNRALRA DALDALVLVR EGAPLASALA QKKRFPGLVA MFARLGEQTG QLPTMLQRAA TQLGTEVQRR AMQLATVLEP LLIVAMGGIV MLIVLAVLMP IIQLNQFVK
|
| |