Gene Ajs_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0585 
Symbol 
ID4673565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp616302 
End bp617672 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content71% 
IMG OID639837711 
ProductTolC family type I secretion outer membrane protein 
Protein accessionYP_984908 
Protein GI121593012 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.449084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.127961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT CTTCCACCCT CCTGGGCATG CCGCGCCTGA ACCGCCTGGC GCGTGCCTGC 
GCCGCCTTGG CCGGCGTGGC GCTGGCCTGG CCGGCCTGGT CGCTTGATCT GCGCCAGGCC
TACGAGGCCG CGCTCCAGAA CGATGCCTCG ATCCGCGCGT CGCGCGCCGC CGCCGACGCC
AGCCGCGAGC GCCTGCCCCA GGCGCAGGCG CAGCGCCTGC CGAGCGTGTC GCTCAGCGCC
ACGCGCAACT ACAACGACCT CACGGCCCGC ACGAGAAATT TCCTCGGCCA GCCGGTGACC
CAGCAGAACC ACTACTACAG CGGCAACCAG AGCCTGACGG TGCGCCAGCC GATCTACCGG
CCGTACAACA ACGCCCTGGT CGACCAGGCG CGGGCCCAGG TGGAGGATGC CGACGCGCTG
CTGGAGCGCG ATGAGTACAG CCTGGTGGTG CGCGTGGGCG AGGCCTATTT CGATGTGCTG
CTGGCGCGCG ACCAACTCGA CCTGGTCGCC GCGCAGAAGG CCAGCTACAC CGTGCAGCTC
GATGCCGCGC GCAAGGGGCT GGCGGCCGGC TCGGGCACCC GCACCGATGT GGACGAGGCC
CAGGCGCGCC TGGACATGAC CGGCGCGCAG GAGCTGGAGG CCCTGCAGAA CCTGGAGTTC
ACGCAGCGCA GGCTGCAGAC GCTGACCGGC CAGCCGTTGG CGCAGTTGGC CGGCCTGGAT
GTGCAGCGCT TCAGGCCCGA GCCGCCCATG CCGGCCCGGC TGGAGGATTG GGTGGCCCTG
GCCGAGGAGG CCAGCCCCGA GCTGCGCTCG CTGCGCGCCC AGGTGGAGGC GGCGCGGCTG
GAGATCGACA AGGCCCAGGC CGGACACAAG CCGACGCTGG ATGCCGTGGC CCAGTGGGCG
CGCTCCAGCA GCGACAGCGT GACCAGCGTG AACTCGCGCT ACGACCAGGG GGTGGTGGGC
CTGCAGCTGA CGATTCCGCT GTATTCGGGC GGCTATGTGA GTTCGACCGT GCGCCAGGCC
CTGGCCGCGC AGGAACGCGC GCGCGAAGCG CTGGAGGCGA CGCGCCTGGA TCTGGGCGTG
CGCGTGCACA AGGAGTTTCG CGGCATGACC GAGGGCGCGC TGCGCATTGC CGCGCTGGAG
CAGGCGGTGC GCTCGGCCGA GCAGGCCGTG ATCTCCAGCC GCAAGTCGCA GCAGGCCGGC
AGCCGCACCA CGGTCGATGT GCTCAATGCC GAGCAGCAAA AGACGATGGC GCTGCGCGAC
CTGGCGCAGG CGCGCTATTT GTACCTGCTG TCGCGCATGC GGCTGCAGTC GCTGGCCGGC
CAGGATCGCC AGGCCAGCAT CGAGCAGGCC AATGCGTCGC TGGCCCCCTG A
 
Protein sequence
MARSSTLLGM PRLNRLARAC AALAGVALAW PAWSLDLRQA YEAALQNDAS IRASRAAADA 
SRERLPQAQA QRLPSVSLSA TRNYNDLTAR TRNFLGQPVT QQNHYYSGNQ SLTVRQPIYR
PYNNALVDQA RAQVEDADAL LERDEYSLVV RVGEAYFDVL LARDQLDLVA AQKASYTVQL
DAARKGLAAG SGTRTDVDEA QARLDMTGAQ ELEALQNLEF TQRRLQTLTG QPLAQLAGLD
VQRFRPEPPM PARLEDWVAL AEEASPELRS LRAQVEAARL EIDKAQAGHK PTLDAVAQWA
RSSSDSVTSV NSRYDQGVVG LQLTIPLYSG GYVSSTVRQA LAAQERAREA LEATRLDLGV
RVHKEFRGMT EGALRIAALE QAVRSAEQAV ISSRKSQQAG SRTTVDVLNA EQQKTMALRD
LAQARYLYLL SRMRLQSLAG QDRQASIEQA NASLAP