| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0582 |
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| Symbol | |
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| ID | 4673544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 611374 |
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| End bp | 613119 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639837708 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_984905 |
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| Protein GI | 121593009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.430347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0200066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAA CCCAAGCCCC TTCCGAATTG CGCCAGGCCG TCGTGGCCCT GCGCCCCTAC
TACGTGCGCG CCGCCTGGTT CAGCCTGTTC GCGAGCCTGC TGGTGCTGGC GCCCTCGGGC
TACATGCTCG AGGTGTACGA GCGCGTGGTC AACAGCCGCA ACCATCTCAC GCTGTGGTGG
CTGACGGTGG CGGTGCTCGG GGCCTTCGTG CTCATGGAGG TGCTGGAATG GGCGCGCGGC
GAGGTGATGC GCGCGGCCGG CGAGGCCCTG GACCGCAAGC TGCGCGTGCG CGTGTTCGAT
GCGATCTTCG AGGCCAATGT GCGCCGCGTG CCCGGCGGCA CGGTGCAGCC GATGCAGGAC
TTCAGGAAGA TCTGCGAATT CCTGCATTCG CCGGCGCTGC TGGCCATCAT GGAGGCGCCC
ATCGCGCTGG TGATGATGGT GCTGCTGTTC CTGATCAGCC CGGTGCTGGG CTGGTCGGCC
GTGGTGTTCG GCGTGTTGCA GGTGGGAGTG ACCTGGCTCA ACGAGCGGCG CACCAAGCCG
CCGCTGATGG AGGCCAACCG CACGGCGATC GCCGCACAGC AGTATGCGGA CGGCACGCTG
CGCAATGCCG AGGTGATCGA GGCCATGGGC ATGCTGCGCA ACACCCACCG CCGCTGGATC
ACCAAGCAGC GGGAGTTCCT GCAGCTGCAG GCCCAGGCGT CGGAGAGCGC CGGGGGCTTC
CAGGCGCTGA GCAAGCTGCT GCAGAACATC CTGAGCTCGA TGCTGCTGGG CCTGGCCTGC
TGGCTGCTGC TGCATGGCGA GCTGCATGGC GGCGGCGGCA TGATGATCGT GAGCTCCATC
CTGGGCGGGC GCATGCTGGC GCCGCTGGTG CAGGTGGTCA CGCAGTGGCA GACGGTGGTG
AATGCGCGCG ACGCCTGGAA CCGGCTGGAT GCGCTGCTGG CCGCGGTGCC GGCCCGGGCG
CCGGCCATGC CGCTGCCCGC GCCGCGCGGC AGCGTGCAGG TGGAGCAGCT GGTGGCCGGC
GCGCCGGGCA GCAATGCGAC GATCCTGCGC GGCATCGCGT TCGCGCTCCA GCCCGGCGAC
GTGCTGGCCG TGGTCGGCCC CTCGGCCTCG GGCAAGACCA CGCTGGCGCG CCTGCTGGTG
GGCCTGTGGC CCGCGGCCAT GGGCAAGGTG CGCCTCGACG GCGTGGATGT GCAGACCTGG
AACAAGGCCG AGCTGGGGCC CCATGTGGGC TACCTGCCCC AGGGCGTGGA GCTGTTCGAG
GGCACGCTGG CCGAGAACAT CGCGCGCTTT GGTGAGGTGG ACAGGCCCAA GGTAGAGGCG
GCGGCGCGGG CCGTAGGGCT GCAGGGGCTG ATCGCCTCCC TGCCCGAGGG CTACGAGACG
CGGGTGGGCC CGGGCGGCGC GCGCCTGTCG GGCGGGCAGC GCCAGCGCGT GGCGCTGGCG
CGGGCGCTGT ATGGCGACCC GGTCTACGTG GTGCTGGACG AGCCGAACTC CAGCCTCGAC
GAGGAGGGCG ACGCCGCCCT GGCCGCCGCG ATCACCCAGG CCAGCGCGCG CGGCGCGACC
GTCGTGGTGA TCACCCACCG CACCAGCGTG CTCGCCGTGG CCAACAAGAT GCTGGTGCTG
CGCGACGGCC AGCAGCAGGC CTTCGGCCCG CGCGACGAGG TGCTCGCCGC GCTGAACCAG
GCGGCGCGCC AGGCAGCGGC CGCAGCGGCC CCGACGGCGC TGGCGCCCGG GCAGGCCGTC
GCCTGA
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| Protein sequence | MNPTQAPSEL RQAVVALRPY YVRAAWFSLF ASLLVLAPSG YMLEVYERVV NSRNHLTLWW
LTVAVLGAFV LMEVLEWARG EVMRAAGEAL DRKLRVRVFD AIFEANVRRV PGGTVQPMQD
FRKICEFLHS PALLAIMEAP IALVMMVLLF LISPVLGWSA VVFGVLQVGV TWLNERRTKP
PLMEANRTAI AAQQYADGTL RNAEVIEAMG MLRNTHRRWI TKQREFLQLQ AQASESAGGF
QALSKLLQNI LSSMLLGLAC WLLLHGELHG GGGMMIVSSI LGGRMLAPLV QVVTQWQTVV
NARDAWNRLD ALLAAVPARA PAMPLPAPRG SVQVEQLVAG APGSNATILR GIAFALQPGD
VLAVVGPSAS GKTTLARLLV GLWPAAMGKV RLDGVDVQTW NKAELGPHVG YLPQGVELFE
GTLAENIARF GEVDRPKVEA AARAVGLQGL IASLPEGYET RVGPGGARLS GGQRQRVALA
RALYGDPVYV VLDEPNSSLD EEGDAALAAA ITQASARGAT VVVITHRTSV LAVANKMLVL
RDGQQQAFGP RDEVLAALNQ AARQAAAAAA PTALAPGQAV A
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