| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0545 |
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| Symbol | |
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| ID | 4673875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 568277 |
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| End bp | 570727 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837674 |
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| Product | ABC transporter related |
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| Protein accession | YP_984871 |
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| Protein GI | 121592975 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.4863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTG AAATACCATC CGGCGGCTGG GCGATCCGCG CGCAGGGCCT GGGCAAGACC
TACCGCTTGT ACGACAAACC GCACCATCGC CTGCTGCAAT CGCTGTGGCG TGGGCGCAAG
AACTACTTCC GAGAGTTCGC GGCCTTGAGC GACGTCTCGT TCGAGCTGGC GCGGGGACAG
ACCCTGGGTA TCATCGGGCG CAACGGCGCG GGCAAGTCCA CGCTGCTGCA GATCATCTGC
GGAACCCTGA CGCCCTCGGC CGGGCAAGTG CAGGTGAACG GACGCATTGC CGCCCTGCTG
GAGCTGGGCA CCGGCTTCAA TCCCGAATTC ACCGGACGCG AAAACATCGT CATCAATGCC
GCCATCCTTG GCTTGAGCCA GCGTGAGATT GCCGAACGGC TCGATGACAT CATCGCCTTC
GCCGATATCG GCCCCTTCAT CGACCAGCCC GTCAAGACTT ATTCCAGCGG CATGTATGTG
CGGCTGGCGT TCGCCGTGGT GGTGCACGTC AACCCCGACA TCCTCATCGT GGACGAAGCC
CTGGCCGTGG GCGATGCCCT GTTCCAGGCC AAGTGCATGA CCCGCATGCG CCGGATGCTG
GACGACGGCC TCACCCTGCT GTTCATCAGC CACGACATCG CGGCCGTCAA GGCCTTGTGC
CAGCGCGCGC TCTGGCTTGA TCACGGACGA GTGCGCGCCC TCGGAGCCAC TCCGGAAGTC
ACGCGCGATT ACGACCACGA CTGGATCCGC CAGGCCAACG CAGCCCACGA CCTGCCCACG
GATGCGCCGG CCGCCGCTGC CGCGTCCGAC GCTGAGGCGC TGTTGCCGTC CGGCGTAGGC
ACGGGCGCGG TCGCACTGCT CGCGGTCGGC TGGGGCGTGG CGGGCATGTT CGGCACCGAA
GCCCGAGCCC AGCACGGCGA CACCCTGCAC CTGCGCCTGC GCCTGCAGCT GCGCCAGCCC
TGCCGGCACC TGGTCGTGTC GTATCACATC AAGAATCGGC AAAACCAGCA TATCCTGGGC
GGCCACAGCA GCGACCGCCC CGAGGTGCAT GGCCGCGCCT GGCAGTCGGG CGAGGTGCTT
GAACTGGCCT TCGACATTCC CGTGCACCTG CACCAGGGCG ACTATGCCCT GACCGTGCTG
GCGGCGAGCA TGGCCGATGT GGCGCATTAC ACCGACGCCG TGTTCCACCT GTGGGCCGAT
GACGTCGCCA CATTGCACGT CATGCCGCGT GCGCATTTTC CGCTCAGCGA CCTGATCGAA
CCCCCGCAGG ACCTGAGCGT CATCCCGCAT GCCCCATGGC TCGTGCTGGA CGATTTTTTC
CCCAACCTGC TCACGGGTTT TCGGGTGGCC GAATACAACG CCCACCTCGC GGCCTTTCCG
CAGCTGTCGG TGCTCTCCAG CCTGGGCGAC TTTGCCTCGC AGCATGCGCG CTATGCCGAG
CATTACCCGG CGCTCGCCCA TCGGGTGCGG CCGTTTGCAC CGGCCTGGCT GGCAGGAGCA
GGGCTGGCGT TCCTGAACTT CCTGAACAAC GCGCACCAGT TCTTGCCGGC GCTGCAGCAG
TACCGGGTGC CTTTCGTGCT GACCCTGTAC CCCGGCGGTG GCTTCGGCCT CGATGAGCCG
GAGAGCGACG CCAAGCTGGC CGCGGTGCTG GCCTGCCCGC TGTTGCAGGC CCTCATCGTC
ACCCAAGGCG TCACGCAGGA CTATGTGCAG CGGTTTGCCG CGGGGCGTGG CCTGGCCTTG
CCCCCCCTGC ACCGCATCGA CGGCGTGGTG GTCAATCCGC TCTATCTCGA GGTCGAGGCG
CCCGCGCGCG ACGCCATGGC CGACAAGGCG GTGCTGGACA TCTGCTTCGT GGCCGAGCGT
TACATGCCCC AGGGCGCGAA CAAGGGCTAC CCCGCATTCA TCGCGGCGGC CCTGGCGTTG
GCGGACTGCG CCCGGTTGCG CTGGCACATC GTGGGCGGTG GCTTCACACC CGAAGAAATC
GACGTCAGCG CGCTGGGCGA CCGCATCCAG TTCCACGGCC GGCTGACCAC GCAGGACTTG
CGTCAGTTCT ATGCCCGCAT GGACCTGATC GTCTCGCCCA ACCAGCCCTA CCTCCTGCAT
CCCGGCAATT TCGACGGTTT CCCCACCGGT TGCTGCGTAG AGGCCGCCCT GTGCGGCGTT
GCCGTCATGG CCACCGATGC CCTGCAGCAA AATCCCGGCT ACGTCGATGG CGAATCCATG
CTGATGCTCG ACGCCGCCTC CGAGGTTTCT CTGGCGCAGC AAATCGAAAT CCGCATCCGC
CAGATACTCG CGGACCCCGC GGTGCTGACC CGCATCGGCC AGGCCGGGCA GGTGTTCACG
CGCGAGCTGT ACGCCCCCGA GCGGCAGATC GGCGAACGCC AGCGCATCCT GCGCAGCGTG
GCCCAGCGGC TCGGGCTGCC GGTGCCGATG GAAGAGAATC CGCTGCCATG A
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| Protein sequence | MSSEIPSGGW AIRAQGLGKT YRLYDKPHHR LLQSLWRGRK NYFREFAALS DVSFELARGQ
TLGIIGRNGA GKSTLLQIIC GTLTPSAGQV QVNGRIAALL ELGTGFNPEF TGRENIVINA
AILGLSQREI AERLDDIIAF ADIGPFIDQP VKTYSSGMYV RLAFAVVVHV NPDILIVDEA
LAVGDALFQA KCMTRMRRML DDGLTLLFIS HDIAAVKALC QRALWLDHGR VRALGATPEV
TRDYDHDWIR QANAAHDLPT DAPAAAAASD AEALLPSGVG TGAVALLAVG WGVAGMFGTE
ARAQHGDTLH LRLRLQLRQP CRHLVVSYHI KNRQNQHILG GHSSDRPEVH GRAWQSGEVL
ELAFDIPVHL HQGDYALTVL AASMADVAHY TDAVFHLWAD DVATLHVMPR AHFPLSDLIE
PPQDLSVIPH APWLVLDDFF PNLLTGFRVA EYNAHLAAFP QLSVLSSLGD FASQHARYAE
HYPALAHRVR PFAPAWLAGA GLAFLNFLNN AHQFLPALQQ YRVPFVLTLY PGGGFGLDEP
ESDAKLAAVL ACPLLQALIV TQGVTQDYVQ RFAAGRGLAL PPLHRIDGVV VNPLYLEVEA
PARDAMADKA VLDICFVAER YMPQGANKGY PAFIAAALAL ADCARLRWHI VGGGFTPEEI
DVSALGDRIQ FHGRLTTQDL RQFYARMDLI VSPNQPYLLH PGNFDGFPTG CCVEAALCGV
AVMATDALQQ NPGYVDGESM LMLDAASEVS LAQQIEIRIR QILADPAVLT RIGQAGQVFT
RELYAPERQI GERQRILRSV AQRLGLPVPM EENPLP
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