| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0542 |
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| Symbol | |
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| ID | 4673191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 563100 |
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| End bp | 566051 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639837671 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_984868 |
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| Protein GI | 121592972 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.211097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.295918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCA TCAGTCCCGA AGATGCGGAT TCAGTTGCCC TGGTGACGGT GATCCTGCCT
GCCTACAACC ACGCCAAGTA TGTGGTTGAA GCGATGGACA GTGTCCGCGC CCAAACCTTC
ACCCGCTGGG AACTCATCGT GATCGACGAT GGTTCCACCG ACGATACCTG GGCTGTCTTG
CAGGCCTACG CGGCACAACA CGGTGATCCC CGCATTCGCC TGTTGACCCA GGCCAATGCC
GGCTCGCACG CCACCCTGAA CCGGGGCCTG GCAATGGCCC GGACCCCTTA TCTCGCGATC
CTGAATTCGG ATGATCGCTA CGCGCCCGAG CGCCTGCAGC GTTTGGTGGA TACCGCGCAG
GCGGCTGCCG ATGAGGTTTT CATCGTCACA GGCTTGCGCC TGATCGATGG CGACGGCAAC
TTTTTCCCCG AGTCGTACTG GTGGAATGCC ATGTACGGTG ACATCTTGCA GCGCTGGCGG
GCCGCGCAGT CCAGTGGCGT GAATCCCGCG CTTCAGACGC TGCTGTGGGG CAACTTCACG
GTTTCCACGT CCAATTTTTT CATGTCCCGC ACGCTTTGGC AGCGGCTGGG GCCTTTCAAG
CGTCTGCGTT ACGTGCCGGA CTGGGACTAC GCGCTGCGGG TCGCCATGGA GCAGCCACGG
GCGTTCCAAT TCCTGCATGA CCAGGCCCTG CTGGAATATC GCCTGCATGG GCGCAACACC
ATCCTGGGCG GTGCGCTGCG CAACCACGCA GAGGCTTACC ACGTGCTGCG CACCTACCAG
AAAAAATGGG CCGCGGCGGG GCAGGCGCTA CCGGAACATG CGCTTGATCG ACTGCATTAC
CTGGCGCGCT TCATTCGCCA CGAGCATGCG CGCCAGCAGT TGGAGCGCCA AAAGCTGGGC
TGGCTGGAGC AAGTCATTCG CCACGAGCAT GCGCGCCAGC AGTTGGAGCG CCAAAAGCTG
GGCTGGCTGG AGCAAGTCAT TCGCCACGAG CATGCGCGCC AGCAGTTGGA GCGCCAAAAG
CTGGGCTGGC TGGAGCAAGT CGATGCGCTG CGGCTGGAGT TGGATTCGGC CCGTACCGCA
GCGGCGCAAT GGCAAGCCAC GGCGCAAGGC ATGCAAGCCT CGCGCTCATG GAGGCTGACG
GTGCCCCTGC GCAAGCTGGC CCAGGTTCTG CGTGCCTGCA GGACCGGGCC CCGCGCAGTG
GTCCGGAAAC TGGCGGCTCG GTGGCGCCGC GCCCAGTCTG GCGGCGTCAA GACGGCCTAT
GGGCAATGGC TGAAGGCGGA AGCCTCGCAG CTGCAGGGGC TGCATGCGCG GGCCGGCATG
CTGATCAACG AGCTGCCGCG CCGGCCGCTG ATTTCCATCG TCATGCCGGT GCATGACACC
CCCCCTCATT TTTTGCAGGC GGCCGTCGAT TCCGTGCAAG GCCAGTGGTA CGGGCATTGG
GAGCTTTGCA TCTGCGACGA CGCCTCCAGC CGGGCGGACA CGCGGCAGCG GCTGCAAACG
CTGCAAGATC AAAGCGACAA AATCAAAGTG ACGCGCCGCG AGACGGCGGG CCACATCGTC
CACGCCACGA ACGATGCCCT CGCGCTGGCC CAGGGCGAGT TTGTCGTGTT CCTCGATCAC
GATGACGTCC TCGCGCCGCA GGCCCTGCTG CGGCTGGCGC AGGCCATCAA TGCGCCGTCG
GCTCCAGACT TCATCTACTC CGACGAGGAC AAGCTCGATG AGCAGGGCAG GCGCTGCCTG
CCGCTTTTCA AACCCCAGTG GTCCCCCACG TTGCAATGGG CGCAAAACTA TGTGGGGCAC
ATCATGTGCG TGCGCCGGGC GTGGCTGGAG CGACTGGGAG GGCTTCTGGA GGGAAGCCAG
GGCAGCCAAG ACCACGACCT CGTCTTGCGG TTGGCCGCGC AGGGCGCCAA GATCGAGCAC
ATTCCCGAAG TGCTCTACCA CTGGCGCATC CATGCCGCCT CCACCTCCGC CAGTCCGCAG
TCCAAGCCTT ACGCACATCT GGCGGGCAGG CAAGCCGTGG CACGCCACTT AGCCAGCCGA
TATGGGGAGC AGTTTGACCG GGTCGATGAC GGCGACCACG CCTTTGTGTA CCAACCGAGG
TTCCGCGTGC CGGCGGGCAC CGTGGCCAGC ATCATCATCC CCACGCGTGA CAAGGCCGAT
CTGCTGGACG CCTGTATCCA AAGTATCCAT CGCCACACCA CCGGGATCGC ATACGAGATC
CTGGTGCTCG ACAATGGCTC CACCGAACCA GAAACCCAGG CCTGTTTCCA GCGCCTGACC
CAGGACGCAC GCGTACGCGT CATTGCCGCC GACATTCCCT TCAACTGGTC CCGACTCAAC
AACATTGGCC GCAGCCACGC GCGCGGGCAA GTGCTGGTCT TCCTGAACAA CGACACCGAA
ATCATCACCC CCGATTGGCT GGTGCGCCTG GTCGAATATG CGCTCTTGCC CGACGTGGCC
ACCGTCGGTG CCCTGCTCCT GTACCCCGAT CGCACCATTC AGCATGCTGG CGTGGTGGTG
GGCATGGGGG GCTGGGCCGA CCATGTCTTC AAGGGCGAAC CGGTTCAGCA TTACCCGACG
CCCTTCGTGT CCAGTGTCGT GCCGCGCAAT GTCCTGGCCA ATACCGGCGC CTGTGTGGCC
GTGGCGACCG CGCGTTTCGA TGCCCTGGGC GGGTTCGATG AAGCCTTTGA AATCTGCGGC
AGCGATGTCG AATTGGGCAT CCGCGCGCAC AAGCAAGGCC TGCTCAACGT CTACCTGCCG
GCGGCAAGGC TCCTGCATCT CGAGAGCAAA ACCCGCAGCC CCCATGTGCC GGAAGTCGAT
TTCCAGCAGT CCGCGCTCAA ATACGCGCCA TACCGCCTGG AGGGCGATCC TTTCTACAAC
CCCAACCTGG ACCTGTCGGC CAGCACTCCG CGGCCAAGGG TCCCCGGTGG GCATGTGCCC
GGGGCGCAGT AA
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| Protein sequence | MTAISPEDAD SVALVTVILP AYNHAKYVVE AMDSVRAQTF TRWELIVIDD GSTDDTWAVL
QAYAAQHGDP RIRLLTQANA GSHATLNRGL AMARTPYLAI LNSDDRYAPE RLQRLVDTAQ
AAADEVFIVT GLRLIDGDGN FFPESYWWNA MYGDILQRWR AAQSSGVNPA LQTLLWGNFT
VSTSNFFMSR TLWQRLGPFK RLRYVPDWDY ALRVAMEQPR AFQFLHDQAL LEYRLHGRNT
ILGGALRNHA EAYHVLRTYQ KKWAAAGQAL PEHALDRLHY LARFIRHEHA RQQLERQKLG
WLEQVIRHEH ARQQLERQKL GWLEQVIRHE HARQQLERQK LGWLEQVDAL RLELDSARTA
AAQWQATAQG MQASRSWRLT VPLRKLAQVL RACRTGPRAV VRKLAARWRR AQSGGVKTAY
GQWLKAEASQ LQGLHARAGM LINELPRRPL ISIVMPVHDT PPHFLQAAVD SVQGQWYGHW
ELCICDDASS RADTRQRLQT LQDQSDKIKV TRRETAGHIV HATNDALALA QGEFVVFLDH
DDVLAPQALL RLAQAINAPS APDFIYSDED KLDEQGRRCL PLFKPQWSPT LQWAQNYVGH
IMCVRRAWLE RLGGLLEGSQ GSQDHDLVLR LAAQGAKIEH IPEVLYHWRI HAASTSASPQ
SKPYAHLAGR QAVARHLASR YGEQFDRVDD GDHAFVYQPR FRVPAGTVAS IIIPTRDKAD
LLDACIQSIH RHTTGIAYEI LVLDNGSTEP ETQACFQRLT QDARVRVIAA DIPFNWSRLN
NIGRSHARGQ VLVFLNNDTE IITPDWLVRL VEYALLPDVA TVGALLLYPD RTIQHAGVVV
GMGGWADHVF KGEPVQHYPT PFVSSVVPRN VLANTGACVA VATARFDALG GFDEAFEICG
SDVELGIRAH KQGLLNVYLP AARLLHLESK TRSPHVPEVD FQQSALKYAP YRLEGDPFYN
PNLDLSASTP RPRVPGGHVP GAQ
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