| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0533 |
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| Symbol | |
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| ID | 4673026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 555815 |
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| End bp | 556303 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639837662 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_984859 |
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| Protein GI | 121592963 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.235675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.091629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTTT TCAGTTTCAT CAAGGAAGCC GGCGAGAAGC TGTTTGGCGG CAAGGACGCG
CAGGCTTCCA CAGCCGCCGC GCCCACGCAG GCCGAGCTCA ACGACAAGGC GGGCAAGGCC
ATCGAGACCT ACATCGCGTC GCAGAACCTG GGCGTGAGCG ACGTGCAGGT CCAGTTCGAA
GGCCCCGAGG GCAAGGTGAC GGTGAAGGGC ACCGCACCTA CGCAAGCGGC CAAGGAAAAA
GTCACCCTGT GCTGCGGCAA CGTGGCCAGC GTGACCAGCG TGGACAACCA GATGAGCGTG
ACCAACCCCG AGCCCGAAGC GCAGTACCAC GACGTGGTGC GCGGCGACAC GCTGAGCGCC
ATCGCCAAGA AGTTCTATGG CGACGCCAAC AAGTACCCGG TGATCTTCGA GGCCAACAAG
CCCATGCTGA CCCACCCCGA CAAGATCTAC CCCGGCCAGA AGCTGCGCAT TCCGCCGCTG
GCCAAGTAA
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| Protein sequence | MGLFSFIKEA GEKLFGGKDA QASTAAAPTQ AELNDKAGKA IETYIASQNL GVSDVQVQFE
GPEGKVTVKG TAPTQAAKEK VTLCCGNVAS VTSVDNQMSV TNPEPEAQYH DVVRGDTLSA
IAKKFYGDAN KYPVIFEANK PMLTHPDKIY PGQKLRIPPL AK
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