Gene Ajs_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0515 
Symbol 
ID4673185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp536686 
End bp537612 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID639837644 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_984841 
Protein GI121592945 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0129365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTA TTCCACCTGC CCTACCGCCG GAAATCATTG TCATCGAACG CGGCTGGCTG 
TCGGCCAACA ACGTGCTGCT GTTGGGGCGC GACTCCACGG CGCTGGTGGA CAGCGGCTAC
TGCGCCCACG CGCCGCAAAC CGTGGCGCTG GTGGAGTCGG CGCTGGACGG GCGTGTGCTG
GACCAGTTGC TCAATACCCA CCTGCACAGC GACCATTGCG GCGGCAATGC CGCGCTGCAG
GCGCGCTGGC CGCAGCTTGC CACCCGCATC CCCCCGGGGC AGTGGGCACA GGTGCAGGAC
TGGGACCCGG TGGCGCTGAG CTACGTGCCC ACCGGCCAGG AGTGCCCGCG CTTTCGTGCC
GACGGCGTGC TGCCCCCCGG CACCGAGGTG CAGCTGGGCG ACCGTGCGTG GCAGGTGCAC
GCAGCCCCGG GGCATGACAC CCATGCCGTG GTGCTGTTCG AGCCGCACGC GCGCGTGCTG
ATCTCGGGCG ACGCGCTCTG GGAGAACGGC TTCGGCGTGG TGTTCCCCGA ACTGGACGGC
GAGCAGGCCT TTGCCGAGGT GGGCGCCACG CTGGACCTGA TCGAGCGGCT GAACCCGCTC
ACCGTGATCC CCGGCCACGG CAGCGTGTTT GGCGACGTGC CCGCCGCGCT GGCGCGGGCG
CGGCGCCGGC TGGCGGGTTT CGAGGCCGAC CCGGTCAAAC ACGCACGCCA CGCGGCCAAG
GTGCTGCTCA AGTACAAGCT GCTGGAATGG CAGCAGGCGC CGCTGGCGCA AGTGCATGCC
TGGTTGGCGG CCACACCGTA CTTCGGCCTG CTGCACCAGC GACACTTTGC CCAGCAGACC
GCATCCGTCT GGGCCGAGCA GCTGATGCAG GAACTGGTGG ACGCCGGCGC GGCCCGGCGC
GAGGGCGGCG CGCTGCTCAA CGCCTGA
 
Protein sequence
MPLIPPALPP EIIVIERGWL SANNVLLLGR DSTALVDSGY CAHAPQTVAL VESALDGRVL 
DQLLNTHLHS DHCGGNAALQ ARWPQLATRI PPGQWAQVQD WDPVALSYVP TGQECPRFRA
DGVLPPGTEV QLGDRAWQVH AAPGHDTHAV VLFEPHARVL ISGDALWENG FGVVFPELDG
EQAFAEVGAT LDLIERLNPL TVIPGHGSVF GDVPAALARA RRRLAGFEAD PVKHARHAAK
VLLKYKLLEW QQAPLAQVHA WLAATPYFGL LHQRHFAQQT ASVWAEQLMQ ELVDAGAARR
EGGALLNA