| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0502 |
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| Symbol | |
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| ID | 4672582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 522329 |
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| End bp | 524149 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639837631 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_984828 |
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| Protein GI | 121592932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.830994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0194391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA AAGCACCTCA CGTGGGCGCC ACCGCCATGG CCGCACCGTC GCTGGCGCTG
GGAATGATCG GCAATTGCAC CATCAGCGCG CTGGTGGATG CGCGCGCCTG CATTGTCTGG
AGCTGCATGC CACGCTTTGA CGGCGACCCG GTGTTCAATG CGCTGGTCCA GCCCGGTCCC
GATGGCAGCC GCTTCGCCAT CGAGCTGGAG GACTTCGCCA GCAGCGAGCA GTGGTACGAG
CCCAATACCG CCGTGCTGCG CACGCACCTG ACCGACGCGC ACGGCAACTG CCTGGAGGTG
ACCGACTTCT GCCCGCGTTT CTTCGCACGT TCTCGCGCCT TTCGCCCCGT GATGCTGGTG
CGCCGCGTGC GACCGGTGCG GGGGGCCCCG CGCATCCGCG TGCTGGTACA GCCGCGCTAC
GACTGGGGCA TGGCCCAGCC TGCCCTCACG CGCGGCAGCA ACCATATCCG CTACGTGGGG
GGCGACTTCA CGCTGCGGCT GAACACCGAC GCGCCCGTGG CCTACGTGCT CTCGGGCGAA
CCCTTTGTAG CGGGGCGCGA ATACAACTTC CTGCTCGGTG CAGACGAAAC GCTCTCCGGC
GGCATTGGCG ACACCGCACG CCACTATGAG CAAGAGACCG TGTCGTACTG GAAGCACTGG
ACCCAGCGCC TGCATCTGCC GCTGCAGTGG CAGGAGGCCG TGATCCGCTC GGCCATCACG
CTGAAGATGT CGCTGTTCGA GGACACGGGC GCCATCGTCG CGGCGATGAC CACGAGCATC
CCCGAATCCG CGCACAGCGG CCGCAACTGG GATTACCGCT ACTGCTGGCT GCGCGACGCG
TTCTTCGTGG TGCGCGCGCT CAACAGCCTG TCGGAAGTGG GCACCATGGA GGACTACCTG
CGCTGGCTCG GCAACATCGT GGCCAAAACC GGCAGCGGCC ACATTCAGCC GCTGTACGGC
ATCGGGCTGG AGCACGAGCT GCCCGAATCC GTCCTGCCCC ACTTGGCCGG CTACCGCGGC
ATGGGCCCGG TGCGCGTGGG CAACCAGGCG GCAGAGCACT TCCAGCACGA CGTATACGGC
AACATCGTGC TGGGCGCGGC GCAGTCCTTC CACGACCGGC GGCTGCTGCA CCCCGCCGGA
GCCGCGGAGT TCGAGCGCCT GGAGCGCGTG GGCGAGCTGG CCGTGCAGGT GTACGGCAAG
CCCGACGCGG GCATGTGGGA GCTGCGCACG CGCGCGCGCA TCCACACCTC GTCAGCCCTC
ATGAGCTGGG CGGCCTGCGA CCGGCTGGCC AAGATCGCAC GCGCACTGCA ACTGCCCGAG
CGCGCCCATT ACTGGCAGCA GCATGCGCAG CGCATGCATG GCGAGATCCT GGAGCGCTCG
TGGCACGCCA AGCGCCGGGT GTTTGCCGAG AGTTTTGGGG GCAGCGAGCT GGACGCCAGC
GTGCTGCTGA TGGCCGAGGT GGGCCTGATC CACCCCACCG ACCCGCGCTT CGTGAGCACG
CTGGACGCCA TGGAACACAC GCTGTGCGAC GGCCCCTTCA TGCGCCGCTA CGAAGCCGCG
GACGATTTCG GCAAGCCCGA AACCGCGTTC AACATCTGCA CCTTCTGGCG CATCGATGCG
CTGGCGCGCA CCGGCCGGCG CGAGCAGGCG CAGGAGATCT TCGAGGCCAT GCTGGCCGTG
CGCAACCCGT TGGGCCTGCT GTCCGAAGAC ACCCACGCCG CCACGGGCGA GATGTGGGGC
AACTTCCCTC AAACCTATTC CATGGTGGGC ATCATCAATG CCGCCATGCG GCTGTCCGCC
CCCTGGGACA GCGTGATCTG A
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| Protein sequence | MTSKAPHVGA TAMAAPSLAL GMIGNCTISA LVDARACIVW SCMPRFDGDP VFNALVQPGP
DGSRFAIELE DFASSEQWYE PNTAVLRTHL TDAHGNCLEV TDFCPRFFAR SRAFRPVMLV
RRVRPVRGAP RIRVLVQPRY DWGMAQPALT RGSNHIRYVG GDFTLRLNTD APVAYVLSGE
PFVAGREYNF LLGADETLSG GIGDTARHYE QETVSYWKHW TQRLHLPLQW QEAVIRSAIT
LKMSLFEDTG AIVAAMTTSI PESAHSGRNW DYRYCWLRDA FFVVRALNSL SEVGTMEDYL
RWLGNIVAKT GSGHIQPLYG IGLEHELPES VLPHLAGYRG MGPVRVGNQA AEHFQHDVYG
NIVLGAAQSF HDRRLLHPAG AAEFERLERV GELAVQVYGK PDAGMWELRT RARIHTSSAL
MSWAACDRLA KIARALQLPE RAHYWQQHAQ RMHGEILERS WHAKRRVFAE SFGGSELDAS
VLLMAEVGLI HPTDPRFVST LDAMEHTLCD GPFMRRYEAA DDFGKPETAF NICTFWRIDA
LARTGRREQA QEIFEAMLAV RNPLGLLSED THAATGEMWG NFPQTYSMVG IINAAMRLSA
PWDSVI
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