Gene Ajs_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0501 
Symbol 
ID4672485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp520894 
End bp522312 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID639837630 
Productalpha,alpha-trehalose-phosphate synthase (UDP-forming) 
Protein accessionYP_984827 
Protein GI121592931 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0380] Trehalose-6-phosphate synthase 
TIGRFAM ID[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0653365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC TCGTCGTCAT CTCCAACCGC CTGGCCGACC CGCGCAAGAG CGCTGCCGGT 
GGCCTGGCCG TGGCCCTGGG CGACGCGCTG GCACGCACGG GCGGCCTGTG GTTCGGCTGG
AGCGGCACCG TCACCGCGGA CGGCACGCCC GGCGAAGGTG CGCTGCAAAC ACACCAGGCC
GGCAACGTGA CCCTGGCCAC CGTGGACCTG TGCCAGGCGG ACCACGCGGC CTACTACCAG
GGCTACGCCA ACAGCGTGCT GTGGCCGGTG CTGCACTACC GGCTGGACCT GGCCGACTTC
AGCGCCAATT ACAGCGAGGG CTACCGCCGC GTGAACCAGA TGTTCGCGCG CAAGCTGCTG
CCGCTGCTGC GCGAGGACGA CGTGATCTGG GTGCACGACT ACCACCTGAT CCCGCTGGCG
GCGGAGCTGC GCGCGCTGGG TTGCCGCCAG CGCATCGGAT TTTTCCTGCA TGTGCCCGTT
CCCCCGCCGC TCATCCTCGC AGCGCTGCCG CAACACGAGT GGTTGATGCG TTCGTTCTTT
GCCTACGACC TGGTGGGCCT GCAAAGCGAG GCCGACGTCG TCCACTTCAC ACGCTACATG
GTCAACGAAG CCCATGCGCA AGAGCTGGAC GGGCAGCGCC TGCGCGCCTT CAACGCCACC
GTGCGCGTGG CGGCCTTCCC CATCGGCATC GATGTGCAGG AGTTCCAGCG CCTGGGCCGC
GCACCAGACG CCGTGCATAC CTGCGAAGCC CTGCGCGCGG AGTATTCACG CCGCCAGCTG
CTGCTGGGCA TTGACCGGCT GGACTACTCC AAGGGCATCC CGCACCGCGT GCGCGCCTTC
CGCCAGCTGC TGGAACGCTA CCCCGAGAAC GAACACAGCG CCACACTGGT GATGATCGCC
TCGCCCTCGC GCGACGACGT GCACGCCTAT GCCGACCTGC GCCAGGAGCT GGAGGGCCTG
TGCGGCGCCA TCAACGGCGA CTATGGCGAT CTGGACTGGA TGCCGCTGCG CTACATCCAC
CGCACCGTCG CCCGCAAGCG CGTGCCCGGC CTGTGCCGCG CGGCACGCGT GGGGCTGGTC
ACGCCGCTGC GCGACGGCAT GAACCTGGTG GCCAAGGAAT ACGTGGTGGC GCAAGAGCCC
GAGGACCCGG GCGTGCTGGT GCTGTCGCGC TTTGCCGGCG CGGCCGAGCA ACTCAAGGAG
GCCTTGCTGG TCAACCCCTA CGACACCCAG GGCATGGCCG ACGCGATCCA GACCGCGCTG
CGCATGCCGC TGTCCGAGCG CCAGTGGCGC CATGAGCGGC TCATGGAACG CATCCAGCGC
CAGGACGTGC ACTGGTGGCG CAACAGCTTC CTGCAGGCGC TGCGCGACGA GGCTGCGCCG
CCGGTCACCG CGCCGGCAGG GGCCGTGGCA GCCACTTGA
 
Protein sequence
MSRLVVISNR LADPRKSAAG GLAVALGDAL ARTGGLWFGW SGTVTADGTP GEGALQTHQA 
GNVTLATVDL CQADHAAYYQ GYANSVLWPV LHYRLDLADF SANYSEGYRR VNQMFARKLL
PLLREDDVIW VHDYHLIPLA AELRALGCRQ RIGFFLHVPV PPPLILAALP QHEWLMRSFF
AYDLVGLQSE ADVVHFTRYM VNEAHAQELD GQRLRAFNAT VRVAAFPIGI DVQEFQRLGR
APDAVHTCEA LRAEYSRRQL LLGIDRLDYS KGIPHRVRAF RQLLERYPEN EHSATLVMIA
SPSRDDVHAY ADLRQELEGL CGAINGDYGD LDWMPLRYIH RTVARKRVPG LCRAARVGLV
TPLRDGMNLV AKEYVVAQEP EDPGVLVLSR FAGAAEQLKE ALLVNPYDTQ GMADAIQTAL
RMPLSERQWR HERLMERIQR QDVHWWRNSF LQALRDEAAP PVTAPAGAVA AT