Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0489 |
Symbol | |
ID | 4672324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 511755 |
End bp | 512759 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639837619 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_984816 |
Protein GI | 121592920 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03637] CRISPR-associated endonuclease Cas1, YPEST subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.121384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA TTGCTGCCGG TGACCTCAAG GCCATACTGC ATTCCCAGAG GGCCAACATC TACTATCTGG AGCACTGCCG GGTGCTCGTC AATGGCGGCC GCGTCGAGTA CGTGACCGAC GCGGGCAAGC GAAGCCTGTA CTGGAACATT CCCATTGCCA ACACCACGAG CATCTTGCTG GGGACGGGCA CCTCGATCAC GCAGGCCGCC ATGCGAGAAC TGGCGAAGGC AGGCGTACTG GTGGGCTTCT GCGGTGGTGG CGGTACGCCG CTTTTCGCAG CCAATGAAGT CGACGTAGAA GTAGCTTGGC TCACACCGCA GAGTGAGTAC CGGCCCACCG AATACCTGCA GTACTGGGTG AAGTTCTGGT TCGATGAGGA ACTGCGCCTG CACGCCGCGA AGCAGTTGCA GACCTGGCGA CTGCAGCGGC TGGCGGCCGA ATGGAACAGC CGCTCTTTGC GTGAAGCCGG TTTTTCCATC GATCTGGGTC GTTTGCAGAG CCTGGTGCAG CAGTTCACAC CACTGATCAG CAACGCCCCT GATGTGACAG CGCTGCTGAC TGACGAGGCA CGCTTGACCA AGGCCCTCTT CAGGCTGGCC GTGGAAGCCG TGGGCTACGG GGAATTCACG CGGGCCAAAC GCGGAACGGG TACCGACGCT GCGAACCGCT TCCTTGACCA TGGCAACTAT CTGGCCTATG GCCTGGGCGC TACCGCGACC TGGGTGTTGG GCCTGCCGCA CGGGCTGGCG GTATTGCACG GCAAGACGCG ACGGGGTGGT CTGGTATTCG ACGCAGCAGA CTTGATCAAG GATGCAGCCA TCCTGCCGCA AGCCTTTCTG TCGGCGATGC GGGGCGATGA TGAACAGCAG TTCCGCCGCC AATGCATAGA GGCGTTGACG CGCAGCGAAT CATTGGATTT CATCATCGAC ACACTCAAAC ACATCGCCAG CACGACGTCG CGGCTGGCCG ACGCGCCCCC TCCTGTTCGG GAGCCAAATG CATGA
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Protein sequence | MEDIAAGDLK AILHSQRANI YYLEHCRVLV NGGRVEYVTD AGKRSLYWNI PIANTTSILL GTGTSITQAA MRELAKAGVL VGFCGGGGTP LFAANEVDVE VAWLTPQSEY RPTEYLQYWV KFWFDEELRL HAAKQLQTWR LQRLAAEWNS RSLREAGFSI DLGRLQSLVQ QFTPLISNAP DVTALLTDEA RLTKALFRLA VEAVGYGEFT RAKRGTGTDA ANRFLDHGNY LAYGLGATAT WVLGLPHGLA VLHGKTRRGG LVFDAADLIK DAAILPQAFL SAMRGDDEQQ FRRQCIEALT RSESLDFIID TLKHIASTTS RLADAPPPVR EPNA
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