Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0470 |
Symbol | |
ID | 4672505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 483135 |
End bp | 485183 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639837600 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_984797 |
Protein GI | 121592901 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.282335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.146944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTCATCGC AAAGACAAGA TAACGTCAAA GTCGTTCCTA CCATTGGTTG CAAACCGGCA GCGGACTTCG TGTTTCCCGT GCGCTGCCCT CCACAGACCC TGATAGGAAC CGGAATGAAG ACCACATTCC CCCATCTACT GCTGCAGCAC GCCGCCCAGC GCCCCGACGC TGCAGCACTG CGCGAGAAAG AATATGGCAT CTGGCAGACC TGGAGCTGGA AAGACGCCGC GGCCGAGGTG CGCCACATGG CCTGCGGGCT GCTGTCGCTG GGCTTTGCCA AGGGCCAGAA CCTGGCGCTG ATCAGCGACA ACCGGCCACA CCTGTACATG GGCTTCGTGG CCGTGCAAAG CGTGGGGGGC GTGCCGATTC CGCTGTACCA GGACGCCGTG GCCGCCGAGA TGACCTTCGT CATCCAGGAC GCGGAGATTG CCTTCGCGTT TGCCGAAAAC CAGGAACAGG TGGACAAGCT GCTGGAAGTG CGCGAATCGG TATCCGGCAT CCAGCACATC ATCTATGACG ACCCGCGCGG CCTGCGCCAC TACGACCAGC CGGGCCTCAT CAGCACCGCG CAGCTGGTGG CGCGCGGCGC CGAGTGGGAC AAGGCCCACC CCGGCGCATG GGATGCCCTG GTGGAGCAGA TCGACCCGCA GGACGTGTCG GTGATCCTCT ACACCTCGGG CACCACGGGC AAGCCCAAGG GCGTGTGCCA GACGCATGCC AGCTTCATCG CCTCTGCGCA AGGCGCGGTG GAGGTGGACC GCCTGGGCCC GCAGGACAAC GTGATTTCCT ACCTGCCCCC GGCGTGGGTG GGGGACCACC TGTTCTCGCT CGCGCAGTGG ATGGTGGCCG GCTTCACCAT CAACTGCCCC GAGTCGGCCA GCACCGTCTC CATCGACCTG CGCGAGATCG GCCCCACCTA CTACTTCGCC CCGCCGCGCG TGTTCGAAGG CATGCTGACG TCGGTCTCCA TCCGCATGGA AGACGCCGCT GCGCCCAAGC GCTGGCTGTT CGAGAAATGC ATGCAGCTGG CGCGCCGTGT GGGCTCCGAC CTCCTGGACG GCAAGCCCGT GGGCGCAATT GACCGCCTCA AGTACCGCCT GGCCGATCTC GCCATCTACG GACCGCTGCG CAACGTGATG GGCCTGTCGC GCATCCGCGT GGCCTACACG GCAGGCGCGG CCATCGGGCC CGACCTGTTC CGCTTCTTCC GCTCCATCGG CATCAACCTC AAGCAGCTCT ACGGTCAGAC GGAAACCTGC GCCTACGTCT GCCTGCAGCG CGATGGCCAG GTGGATCTGA ACACCGTGGG CCAGGCGGCT CCCGGCATCG AGCTGAAGAT CGCCGACAAC GGCGAGGTGC TGGTCAAGGG CGTGTCGGTG CTCAAGGAGT ACTACAAGCG GCCCGACGCC ACCGCCGAGG TGATCGACGC CGAAGGCTAC TTCCACACCG GCGATGCCGG CGTGATCGAC GCCAACGGCC AGCTGCGCAT CATCGACCGC GCCAAAGACG TGGGCAAGAC GGCCAGCGGC GCCATGTTCG CGCCCAACTA CATCGAAAAC AAGCTCAAGT TCTTCCCGCA CATCAAGGAA GCCGTCTGCT TCGGCAACCA GCGCGATCAG GTCTGTGCCT TCATCAACAT CGACTACGAG GCCGTGGGCA ACTGGGCCGA GCGCCAGGGC ATCCCTTACG GCGGCTATGT GGACCTGGCC TCCAAGCCCA AGGTGATCGA GCTGATCGCC GACTGCATCT CGCAGGTGAA CGCCGACCTG GCCGCCGAAG CCGGCATGGC CGACACACAG GTCGCGCGCT TCCTGGTGCT GCACAAGGAG CTGGACCCCG ACGACGACGA ACTGACCCGC ACGCGCAAGG TGCGCCGCAA TTTCATCGCC GAGAAGTACG GCGTGCTGGT GGATGCGCTG TACACGGGCA AGGCCGAGCA GTTCATCGAA ACGCAGGTGA AGTTCGAGGA CGGGCGCAAG GGCAGCGTGA GCGCCACGCT GAAAATCACC GACGCCAAGA CCTTCCCCGC CACCCGGGCG GCCGCCTGA
|
Protein sequence | MSSQRQDNVK VVPTIGCKPA ADFVFPVRCP PQTLIGTGMK TTFPHLLLQH AAQRPDAAAL REKEYGIWQT WSWKDAAAEV RHMACGLLSL GFAKGQNLAL ISDNRPHLYM GFVAVQSVGG VPIPLYQDAV AAEMTFVIQD AEIAFAFAEN QEQVDKLLEV RESVSGIQHI IYDDPRGLRH YDQPGLISTA QLVARGAEWD KAHPGAWDAL VEQIDPQDVS VILYTSGTTG KPKGVCQTHA SFIASAQGAV EVDRLGPQDN VISYLPPAWV GDHLFSLAQW MVAGFTINCP ESASTVSIDL REIGPTYYFA PPRVFEGMLT SVSIRMEDAA APKRWLFEKC MQLARRVGSD LLDGKPVGAI DRLKYRLADL AIYGPLRNVM GLSRIRVAYT AGAAIGPDLF RFFRSIGINL KQLYGQTETC AYVCLQRDGQ VDLNTVGQAA PGIELKIADN GEVLVKGVSV LKEYYKRPDA TAEVIDAEGY FHTGDAGVID ANGQLRIIDR AKDVGKTASG AMFAPNYIEN KLKFFPHIKE AVCFGNQRDQ VCAFINIDYE AVGNWAERQG IPYGGYVDLA SKPKVIELIA DCISQVNADL AAEAGMADTQ VARFLVLHKE LDPDDDELTR TRKVRRNFIA EKYGVLVDAL YTGKAEQFIE TQVKFEDGRK GSVSATLKIT DAKTFPATRA AA
|
| |