Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0456 |
Symbol | |
ID | 4671991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 469304 |
End bp | 470449 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639837586 |
Product | putative zinc protease protein |
Protein accession | YP_984783 |
Protein GI | 121592887 |
COG category | [R] General function prediction only |
COG ID | [COG4324] Predicted aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.428295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.446741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAT CCACCCCATC GCCCCGGCGC CCGTGGCCGC TGCTGGCAGC CGCGCTGCTG CTAGGCGGCT GCGCCCAGTC GGGCGGCACG TTGGGCTACT ACTGGCAGTC CCTGCGCGGG CACCTGGAGA TCATGAACGC CGCGCGCCCG GTGCAGGAGT GGATCACCCA CCCCGACACC TCCGCGCCGC TGCGCGAGCG GCTGCAGCTG GCCCAGCGCG CCCGGGCGTT CGCGGTGGAC GAGCTGGCCC TGCCCGACAA CGCCAGCTAC CGCCGCTATG CGCGCCTGGA CCGCACGGCT GCCGTGTGGA ACGTGGTGGC GGCGGGCCCT TATTCGCTCA CGCTGCACCG CTGGTGCTTT CCGATCACCG GCTGCATCGG CTACCGCGGC TACTTCGACG AGCCCGGCGC ACGGGCCGAG GCCGCGCGCC TGGCGGCCAC CGGACTGGAG GTCAGCGTGT ACGGCGTACC CGCGTATTCC ACGCTGGGCT ACAGCAACTG GATGGGGGGC GACCCGCTGC TGTCCACCTT CATCGGCTGG CCGGAGGGCG ACTTCGTGCG GCTGTTGCTG CACGAATTGG CGCACCAGGT GGCGTATGCC GAGGGCGATA CCGCGTTCAA CGAATCCTAC GCCACGGCAG TGGAGCGGCT GGGCGTGCAG CGCTGGCTGC AGCAGCACGC CACCCCGGCC ACCCGCGCCC AGTTCGCGGC CAGCGAGGAG CGCCGCGCGC AATGGCGCGC GCTGACCCAG GTAACGCGCC AGCGCCTGGC CGAGATTTAT GCATCAAATG GGGCTGTAGC GCCCGACTAT CAAGCGCTAT CAGCTATGAA AAAAGAAGCA ATGCAGGACT TCCGCGCCGC CTATGCCACG CTGCGCGCGC GCTGGCTGGC CGCACACGTC CCCGAGGCAC AGCTGGCGGC GCTGGACCGT TGGGTGCGCG ATGCCAACAA CGCCAGCTTC GCCGCGCAGG CGGCTTATGA CGAAGGGGTG CCCGCGTTCA TGGCGCTGTT CGAGCGCGAG GGGCGCGACT GGCCGCGCTT TCATGCAGCC GTGCGGGCGC TGGCCCAGGC GCCGCAGGCC GAGCGCACCG CCGCGCTGCA GGCGCTGGCG CCACAGCCGC CCCGGGTGGC CCACGGCGGA GGCTGA
|
Protein sequence | MSTSTPSPRR PWPLLAAALL LGGCAQSGGT LGYYWQSLRG HLEIMNAARP VQEWITHPDT SAPLRERLQL AQRARAFAVD ELALPDNASY RRYARLDRTA AVWNVVAAGP YSLTLHRWCF PITGCIGYRG YFDEPGARAE AARLAATGLE VSVYGVPAYS TLGYSNWMGG DPLLSTFIGW PEGDFVRLLL HELAHQVAYA EGDTAFNESY ATAVERLGVQ RWLQQHATPA TRAQFAASEE RRAQWRALTQ VTRQRLAEIY ASNGAVAPDY QALSAMKKEA MQDFRAAYAT LRARWLAAHV PEAQLAALDR WVRDANNASF AAQAAYDEGV PAFMALFERE GRDWPRFHAA VRALAQAPQA ERTAALQALA PQPPRVAHGG G
|
| |